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Mycobacterium phage Gator
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Detailed Information for Phage Gator
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAndrew Ross, Justin Quezada
Year Found2018
Location FoundLyndhurst, NJ USA
Finding InstitutionMontclair State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.812 N, 74.1243 W Map
Discovery NotesOur Gator phage was obtained beneath a pine tree in Lyndhurst, NJ. The sample was initially obtained from a moist location.
Naming NotesGator was named after the phage's appearance: head with a long body/tail. In the photo obtained it also looked like Gator's head was surrounded by minos.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 15, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1132
Genome length (bp)76351
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionMontclair State University
Annotation StatusIn GenBank
Plaque NotesRound, circular head with long narrow tail. Some phage showed slight curvature in the tail while others were almost 90 degree angles.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Gator_1

Gator_2

Gator_3

Gator_4

Gator_5
(terminase small subunit)

Gator_6

Gator_7
(terminase large subunit)

Gator_8

Gator_9
(portal protein)

Gator_10
(capsid maturation protease)

Gator_11
(major capsid protein)

Gator_12

Gator_13
(head-to-tail adaptor)

Gator_14
(head-to-tail stopper)

Gator_15

Gator_16
(tail terminator)

Gator_17
(major tail protein)

Gator_18
(tail assembly chaperone)

Gator_19
(tail assembly chaperone)

Gator_20
(tape measure protein)

Gator_21
(minor tail protein)

Gator_22

Gator_23

Gator_24
(minor tail protein)

Gator_25
(minor tail protein)

Gator_26

Gator_27

Gator_28
(RNA polymerase sigma factor)

Gator_29

Gator_30
(lysin A)

Gator_31
(holin)

Gator_32

Gator_33
(lysin B)

Gator_34
(membrane protein)

Gator_35
(NrdH-like glutaredoxin)

Gator_36
(HNH endonuclease)

Gator_37
(Lsr2-like DNA bridging protein)

Gator_38

Gator_39

Gator_40

Gator_41

Gator_42

Gator_43

Gator_44

Gator_45

Gator_46

Gator_47

Gator_48

Gator_49
(membrane protein)

Gator_50
(tyrosine integrase)

Gator_51

Gator_52
(membrane protein)

Gator_53
(immunity repressor)

Gator_54

Gator_55
(membrane protein)

Gator_56
(pentapeptide repeat protein)

Gator_57

Gator_58

Gator_59

Gator_60

Gator_61

Gator_62

Gator_63

Gator_64

Gator_65
(Cas4-like exonuclease)

Gator_66

Gator_67
(ERF family ssDNA binding protein)

Gator_68

Gator_69

Gator_70

Gator_71

Gator_72

Gator_73

Gator_74
(DprA-like DNA processing chain A)

Gator_75
(HNH endonuclease)

Gator_76

Gator_77

Gator_78

Gator_79
(DnaB-like dsDNA helicase)

Gator_80

Gator_81
(WhiB family transcription factor)

Gator_82

Gator_83

Gator_84
(holliday junction resolvase)

Gator_85
(memrane protein)

Gator_86
(polynucleotide kinase)

Gator_87

Gator_88
(membrane protein)

Gator_89
(RNA ligase)

Gator_90
(helix-turn-helix DNA binding domain protein)

Gator_91
(WhiB family transcription factor)

Gator_92

Gator_93

Gator_94

Gator_95

Gator_96

Gator_97

Gator_98
(ssDNA binding protein)

Gator_99
(ClpP-like protease)

Gator_100

Gator_101

Gator_102

Gator_103
(helix-turn-helix DNA binding domain protein)

Gator_104
(HNH endonuclease)

Gator_107

Gator_108

Gator_109
(hydrolase)

Gator_110
(MazG-like nucleotide pyrophosphohydrolase)

Gator_111

Gator_112
(DnaQ-like exonuclease)

Gator_113

Gator_114

Gator_115

Gator_116

Gator_117
(RecA-like DNA recombinase)

Gator_118

Gator_119

Gator_120

Gator_121

Gator_122

Gator_123

Gator_124

Gator_125

Gator_126

Gator_127

Gator_128

Gator_129
(RNA polymerase sigma factor)

Gator_130

Gator_131

Gator_132

Gator_133

Gator_134

Gator_135
(hydrolase)

Gator_136

Gator_137

Gator_138

Gator_139

Gator_140

Gator_141

Gator_142

Gator_143

Gator_144

Gator_145

Gator_146

Gator_147

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN096361
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 75
Pitt Freezer Box Grid# G11
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload