Mycobacterium phage Goldilocks
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Detailed Information for Phage Goldilocks
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEvelyn Lewis and Grahm Skowronski
Year Found2015
Location FoundNorfolk, VA USA
Finding InstitutionOld Dominion University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates36.885900 N, 76.305700 W Map
Naming NotesIt took a while to get the conditions just right for this phage to be properly purified thus affectionately being named Goldilocks
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage366
Genome length (bp)75728
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesGoldilocks displays multiple plaque morphological types; a 0.5mm temperate plaque and a 2.5mm temperate plaque. A total of 10 purifications were done before doing an EM that showed homogeneous viruses.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Goldilocks_1

Goldilocks_2

Goldilocks_3

Goldilocks_4

Goldilocks_5

Goldilocks_6
(terminase small subunit)

Goldilocks_7
(membrane domain protein)

Goldilocks_8

Goldilocks_9

Goldilocks_10
(terminase large subunit)

Goldilocks_11

Goldilocks_12
(portal protein)

Goldilocks_13
(capsid maturation protease)

Goldilocks_14
(major capsid protein)

Goldilocks_15
(head-to-tail connector protein)

Goldilocks_16
(head-to-tail connector protein)

Goldilocks_17
(head-to-tail connector protein)

Goldilocks_18
(head-to-tail connector protein)

Goldilocks_19
(head-to-tail connector protein)

Goldilocks_20
(major tail protein)

Goldilocks_21
(tail assembly chaperone)

Goldilocks_22
(tail assembly chaperone)

Goldilocks_23
(tape measure protein)

Goldilocks_24
(minor tail protein)

Goldilocks_25
(minor tail protein)

Goldilocks_26
(minor tail protein)

Goldilocks_27
(minor tail protein)

Goldilocks_28
(D-ala-D-ala carboxypeptidase)

Goldilocks_29

Goldilocks_30

Goldilocks_31
(HTH DNA binding protein)

Goldilocks_32
(membrane domain protein)

Goldilocks_33
(lysin A)

Goldilocks_34
(holin)

Goldilocks_35

Goldilocks_36
(lysin B)

Goldilocks_37
(membrane domain protein)

Goldilocks_38
(glutaredoxin)

Goldilocks_39
(DNA bridging protein)

Goldilocks_40

Goldilocks_41

Goldilocks_42

Goldilocks_43

Goldilocks_44
(HNH endonuclease)

Goldilocks_45

Goldilocks_46

Goldilocks_47

Goldilocks_48

Goldilocks_49

Goldilocks_50

Goldilocks_51

Goldilocks_52

Goldilocks_53
(membrane domain protein)

Goldilocks_54
(integrase)

Goldilocks_55

Goldilocks_56
(membrane domain protein)

Goldilocks_57
(immunity repressor)

Goldilocks_58

Goldilocks_59
(membrane domain protein)

Goldilocks_60
(pentapeptide repeat protein)

Goldilocks_61

Goldilocks_62
(DNA binding protein)

Goldilocks_63

Goldilocks_64

Goldilocks_65

Goldilocks_66

Goldilocks_67

Goldilocks_68

Goldilocks_69

Goldilocks_70

Goldilocks_71

Goldilocks_72
(ERF family ssDNA binding protein)

Goldilocks_73

Goldilocks_74

Goldilocks_75

Goldilocks_76

Goldilocks_77
(membrane domain protein)

Goldilocks_78

Goldilocks_79
(DNA processing chain A)

Goldilocks_80
(HNH endonuclease)

Goldilocks_81

Goldilocks_82

Goldilocks_83

Goldilocks_84
(dsDNA helicase)

Goldilocks_85

Goldilocks_86
(WhiB family transcription factor)

Goldilocks_87

Goldilocks_88

Goldilocks_89
(holiday junction resolvase)

Goldilocks_90
(membrane domain protein)

Goldilocks_91
(polynucleotide kinase)

Goldilocks_92

Goldilocks_93
(membrane domain protein)

Goldilocks_94
(RNA ligase)

Goldilocks_95
(HTH DNA binding protein)

Goldilocks_96
(WhiB family transcription factor)

Goldilocks_97

Goldilocks_98

Goldilocks_99

Goldilocks_100

Goldilocks_101

Goldilocks_102
(DNA methylase)

Goldilocks_103
(ssDNA binding protein)

Goldilocks_104
(ClpP protease)

Goldilocks_105

Goldilocks_106

Goldilocks_107

Goldilocks_108
(HTH DNA binding protein)

Goldilocks_109
(HNH endonuclease)

Goldilocks_112

Goldilocks_113

Goldilocks_114
(HNH endonuclease)

Goldilocks_115
(hydrolase)

Goldilocks_116

Goldilocks_117
(DNA polymerase III subunit)

Goldilocks_118

Goldilocks_119
(DNA recombinase)

Goldilocks_120

Goldilocks_121

Goldilocks_122

Goldilocks_123

Goldilocks_124

Goldilocks_125

Goldilocks_126

Goldilocks_127

Goldilocks_128

Goldilocks_129

Goldilocks_130

Goldilocks_131

Goldilocks_132
(helix-turn-helix DNA binding domain protein)

Goldilocks_133

Goldilocks_134

Goldilocks_135

Goldilocks_136

Goldilocks_137

Goldilocks_138

Goldilocks_139

Goldilocks_140

Goldilocks_141

Goldilocks_142

Goldilocks_143

Goldilocks_144

Goldilocks_145

Goldilocks_146

Goldilocks_147

Goldilocks_148

Goldilocks_149

Goldilocks_150

Goldilocks_151

Goldilocks_152
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX834009
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 22
Pitt Freezer Box Grid# E1
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload