Mycobacterium phage Lilpickle
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Detailed Information for Phage Lilpickle
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByTyler Raymond
Year Found2015
Location FoundFort Kent, ME USA
Finding InstitutionUniversity of Maine, Fort Kent
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates47.250164 N, 68.586523 W Map
Discovery NotesThe phage Lilpickle came from inside our campus greenhouse.
Naming NotesThe name Lilpickle, is also a the name of my winter car. Which was named by one of my friends.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 16, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1073
Genome length (bp)74969
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Lilpickle_1

Lilpickle_2

Lilpickle_3

Lilpickle_4

Lilpickle_5
(terminase, small subunit)

Lilpickle_6

Lilpickle_7
(terminase, large subunit)

Lilpickle_8

Lilpickle_9
(portal protein)

Lilpickle_10
(capsid maturation protease)

Lilpickle_11
(major capsid protein)

Lilpickle_12

Lilpickle_13
(head-to-tail adaptor)

Lilpickle_14
(head-to-tail stopper)

Lilpickle_15

Lilpickle_16
(tail terminator)

Lilpickle_17
(major tail protein)

Lilpickle_18

Lilpickle_19
(tail assembly chaperone)

Lilpickle_20
(tail assembly chaperone)

Lilpickle_21
(tape measure protein)

Lilpickle_22
(minor tail protein)

Lilpickle_23
(minor tail protein)

Lilpickle_24
(minor tail protein)

Lilpickle_25
(minor tail protein)

Lilpickle_26
(minor tail protein, D-ala-D-ala carboxypeptidase)

Lilpickle_27

Lilpickle_28

Lilpickle_29
(helix-turn-helix DNA binding domain protein)

Lilpickle_30
(membrane protein)

Lilpickle_31
(lysin A)

Lilpickle_32
(holin)

Lilpickle_33

Lilpickle_34
(lysin B)

Lilpickle_35

Lilpickle_36
(NrdH-like glutaredoxin)

Lilpickle_37
(Lsr2-like DNA bridging protein)

Lilpickle_38

Lilpickle_39

Lilpickle_40

Lilpickle_41

Lilpickle_42

Lilpickle_43

Lilpickle_44

Lilpickle_45

Lilpickle_46

Lilpickle_47

Lilpickle_48

Lilpickle_49

Lilpickle_50

Lilpickle_51
(membrane protein)

Lilpickle_52
(tyrosine integrase)

Lilpickle_53

Lilpickle_54
(membrane protein)

Lilpickle_55
(immunity repressor)

Lilpickle_56

Lilpickle_57
(membrane protein)

Lilpickle_58
(pentapeptide repeat protein)

Lilpickle_59

Lilpickle_60

Lilpickle_61

Lilpickle_62

Lilpickle_63

Lilpickle_64

Lilpickle_65

Lilpickle_66
(exonuclease)

Lilpickle_67

Lilpickle_68
(ssDNA binding protein, ERF family)

Lilpickle_69

Lilpickle_70

Lilpickle_71

Lilpickle_72

Lilpickle_73

Lilpickle_74

Lilpickle_75
(DprA-like DNA processing chain A)

Lilpickle_76
(HNH endonuclease)

Lilpickle_77

Lilpickle_78

Lilpickle_79

Lilpickle_80
(DnaB-like dsDNA helicase)

Lilpickle_81

Lilpickle_82
(WhiB family transcription factor)

Lilpickle_83

Lilpickle_84

Lilpickle_85
(Holliday junction revolvase)

Lilpickle_86
(membrane protein)

Lilpickle_87
(polynucleotide kinase)

Lilpickle_88

Lilpickle_89

Lilpickle_90
(RNA ligase)

Lilpickle_91
(helix-turn-helix DNA binding domain protein)

Lilpickle_92
(WhiB family transcription factor)

Lilpickle_93

Lilpickle_94

Lilpickle_95

Lilpickle_96

Lilpickle_97

Lilpickle_98
(DNA methylase)

Lilpickle_99
(ssDNA binding protein)

Lilpickle_100
(ClpP-like protease)

Lilpickle_101

Lilpickle_102

Lilpickle_103

Lilpickle_104
(excise)

Lilpickle_105
(HNH endonuclease)

Lilpickle_108

Lilpickle_109

Lilpickle_110
(deoxycytidylate deaminase)

Lilpickle_111

Lilpickle_112
(DnaQ-like (DNA polymerase III subunit))

Lilpickle_113

Lilpickle_114
(RecA-like DNA recombinase)

Lilpickle_115

Lilpickle_116

Lilpickle_117

Lilpickle_118

Lilpickle_119

Lilpickle_120

Lilpickle_121

Lilpickle_122

Lilpickle_123

Lilpickle_124

Lilpickle_125

Lilpickle_126

Lilpickle_127

Lilpickle_128
(helix-turn-helix DNA binding protein)

Lilpickle_129

Lilpickle_130

Lilpickle_131

Lilpickle_132

Lilpickle_133

Lilpickle_134

Lilpickle_135

Lilpickle_136

Lilpickle_137

Lilpickle_138

Lilpickle_139

Lilpickle_140

Lilpickle_141

Lilpickle_142

Lilpickle_143

Lilpickle_144

Lilpickle_145

Lilpickle_146
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586050
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 3.3 x 10^7
Pitt Freezer Box# 46
Pitt Freezer Box Grid# C4
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload