Mycobacterium phage Harella
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Detailed Information for Phage Harella
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesFlumen
Found ByHope Harel
Year Found2018
Location FoundPort St. Lucie, FL USA
Finding InstitutionIndian River State College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature37°C
GPS Coordinates27.3282 N, 80.4009 W Map
Discovery NotesSoil was collected from underneath a well mulched Palm Tree on the Pruitt Campus of Indian River State College
Naming NotesNamed after a mixture between last names of the founder and founders significant other.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 27, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage75
Genome length (bp)76859
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionIndian River State College
Annotation StatusIn GenBank
Plaque NotesModerate size, often developed smaller distinct plaques.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Harella_1

Harella_2

Harella_3

Harella_4

Harella_5
(terminase, small subunit)

Harella_6

Harella_7
(terminase, large subunit)

Harella_8

Harella_9
(portal protein)

Harella_10
(capsid maturation protease)

Harella_11
(major capsid protein)

Harella_12

Harella_13
(head-to-tail adaptor)

Harella_14
(head-to-tail stopper)

Harella_15

Harella_16
(tail terminator)

Harella_17
(major tail protein)

Harella_18
(tail assembly chaperone)

Harella_19
(tail assembly chaperone)

Harella_20
(endonuclease VII)

Harella_21
(tape measure protein)

Harella_22
(minor tail protein)

Harella_23
(minor tail protein)

Harella_24
(minor tail protein)

Harella_25
(minor tail protein)

Harella_26
(minor tail protein, D-ala-D-ala carboxypeptidase)

Harella_27
(minor tail protein)

Harella_28

Harella_29
(helix-turn-helix DNA binding domain)

Harella_30

Harella_31
(lysin A)

Harella_32
(holin)

Harella_33

Harella_34
(lysin B)

Harella_35

Harella_36
(NrdH-like glutaredoxin)

Harella_37
(HNH endonuclease)

Harella_38

Harella_39
(Lsr2-like DNA bridging protein)

Harella_40

Harella_41

Harella_42

Harella_43

Harella_44

Harella_45

Harella_46

Harella_47

Harella_48

Harella_49

Harella_50

Harella_51

Harella_52
(tyrosine integrase)

Harella_53

Harella_54

Harella_55
(immunity repressor)

Harella_56

Harella_57

Harella_58
(pentapeptide repeat protein)

Harella_59

Harella_60

Harella_61

Harella_62

Harella_63

Harella_64

Harella_65

Harella_66

Harella_67
(exonuclease)

Harella_68

Harella_69
(ssDNA binding protein, ERF family)

Harella_70

Harella_71

Harella_72

Harella_73

Harella_74

Harella_75

Harella_76
(DprA-like DNA processing chain A)

Harella_77
(HNH endonuclease)

Harella_78

Harella_79

Harella_80

Harella_81
(DNAB-like dsDNA helicase)

Harella_82

Harella_83
(WhiB family transcription factor)

Harella_84

Harella_85

Harella_86
(Holliday junction resolvase)

Harella_87

Harella_88
(polynucleotide kinase)

Harella_89

Harella_90

Harella_91
(RNA ligase)

Harella_92
(helix-turn-helix DNA binding domain)

Harella_93
(WhiB family transcription factor)

Harella_94

Harella_95

Harella_96

Harella_97

Harella_98

Harella_99
(endonuclease VII)

Harella_100
(ssDNA binding protein, ERF family)

Harella_101
(ClpP-like protease)

Harella_102

Harella_103

Harella_104

Harella_105
(helix-turn-helix DNA binding domain)

Harella_106
(HNH endonuclease)

Harella_107

Harella_110

Harella_111

Harella_112
(hydrolase)

Harella_113
(MazG-like nucleotide pyrophosphohydrolase)

Harella_114

Harella_115
(DnaQ-like (DNA polymerase III subunit))

Harella_116

Harella_117

Harella_118

Harella_119

Harella_120
(RecA-like DNA Recombinase)

Harella_121

Harella_122

Harella_123

Harella_124

Harella_125

Harella_126

Harella_127

Harella_128

Harella_129

Harella_130

Harella_131

Harella_132

Harella_133
(helix-turn-helix DNA binding domain)

Harella_134

Harella_135

Harella_136

Harella_137

Harella_138

Harella_139

Harella_140

Harella_141

Harella_142

Harella_143

Harella_144

Harella_145

Harella_146

Harella_147

Harella_148

Harella_149

Harella_150

Harella_151

Harella_152

Harella_153
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW291023
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 77
Pitt Freezer Box Grid# H9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload