Detailed Information for Phage Flypotenuse |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Alexis Jackson |
Year Found | 2018 |
Location Found | Blacksburg, VA USA |
Finding Institution | Virginia Tech |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 37.2284 N, 80.4248 W Map |
Discovery Notes | found on a dirt path which has heavy traffic between two academic buildings at Virginia Tech ( Robeson and Pamplin) |
Naming Notes | The name came from the word Hypotenuse and Fly. Hypotenuse came from the fact it was a long tail and fly because I believed it was a cool phage. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Nov 30, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2017 |
Genome length (bp) | 75248 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCTTGTCA |
GC Content | 67.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | E |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Virginia Tech |
Annotation Status | In GenBank |
Plaque Notes | Plaques were clear with a barely noticeable halo around it. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK937593 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
80 |
Pitt Freezer Box Grid# |
B7 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |