Mycobacterium phage Traaww1
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Detailed Information for Phage Traaww1
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByTerell Hamlet and Brandon Reed
Year Found2015
Location FoundLilburn, GA USA
Finding InstitutionGeorgia Gwinnett College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates33.97823 N, 84.002694 W Map
Discovery Noteswas sunny, near a garden and had slight shade.

88 degrees F

dug 1 inch into the soil
Naming NotesIt is just a nickname that was given to me when I was younger.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 10, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1191
Genome length (bp)75423
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque Noteslytic, 2mm in circumferences
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Traaww1_1

Traaww1_2

Traaww1_3

Traaww1_4

Traaww1_5
(terminase, small subunit)

Traaww1_6

Traaww1_7
(terminase, large subunit)

Traaww1_8

Traaww1_9
(portal protein)

Traaww1_10
(capsid maturation protease)

Traaww1_11
(major capsid protein)

Traaww1_12

Traaww1_13
(head-to-tail adaptor)

Traaww1_14
(head-to-tail stopper)

Traaww1_15

Traaww1_16
(tail terminator)

Traaww1_17
(major tail protein)

Traaww1_18
(tail assembly chaperone)

Traaww1_19
(tail assembly chaperone)

Traaww1_20
(tape measure protein)

Traaww1_21
(minor tail protein)

Traaww1_22
(minor tail protein)

Traaww1_23
(minor tail protein)

Traaww1_24
(minor tail protein)

Traaww1_25
(minor tail protein, D-ala-D-ala carboxypeptidase)

Traaww1_26

Traaww1_27

Traaww1_28
(helix-turn-helix DNA binding domain protein)

Traaww1_29
(membrane protein)

Traaww1_30
(lysin A)

Traaww1_31
(holin)

Traaww1_32

Traaww1_33
(lysin B)

Traaww1_34
(membrane protein)

Traaww1_35
(NrdH-like glutaredoxin)

Traaww1_36
(Lsr2-like DNA bridging protein)

Traaww1_37

Traaww1_38

Traaww1_39

Traaww1_40

Traaww1_41

Traaww1_42

Traaww1_43

Traaww1_44

Traaww1_45

Traaww1_46

Traaww1_47
(membrane protein)

Traaww1_48
(tyrosine integrase)

Traaww1_49

Traaww1_50
(membrane protein)

Traaww1_51
(immunity repressor)

Traaww1_52

Traaww1_53
(membrane protein)

Traaww1_54
(pentapeptide repeat protein)

Traaww1_55

Traaww1_56

Traaww1_57

Traaww1_58

Traaww1_59

Traaww1_60

Traaww1_61

Traaww1_62

Traaww1_63
(exonuclease)

Traaww1_64

Traaww1_65
(ssDNA binding protein, ERF family)

Traaww1_66

Traaww1_67

Traaww1_68

Traaww1_69

Traaww1_70

Traaww1_71

Traaww1_72
(DprA-like DNA processing chain A)

Traaww1_73
(HNH endonuclease)

Traaww1_74

Traaww1_75

Traaww1_76

Traaww1_77
(DnaB-like dsDNA helicase)

Traaww1_78

Traaww1_79
(WhiB family transcription factor)

Traaww1_80

Traaww1_81

Traaww1_82
(Holliday junction resolvase)

Traaww1_83
(membrane protein)

Traaww1_84
(polynucleotide kinase)

Traaww1_85

Traaww1_86
(membrane protein)

Traaww1_87
(RNA ligase)

Traaww1_88
(helix-turn-helix DNA binding domain protein)

Traaww1_89
(WhiB family transcription factor)

Traaww1_90

Traaww1_91

Traaww1_92

Traaww1_93

Traaww1_94

Traaww1_95
(endonuclease VII)

Traaww1_96
(ssDNA binding protein)

Traaww1_97
(ClpP-like protease)

Traaww1_98

Traaww1_99

Traaww1_100

Traaww1_101
(excise)

Traaww1_102
(HNH endonuclease)

Traaww1_105

Traaww1_106

Traaww1_107
(deoxycytidylate deaminase)

Traaww1_108
(nucleotide pyrophosphohydrolase)

Traaww1_109

Traaww1_110
(DnaQ-like (DNA polymerase III subunit))

Traaww1_111

Traaww1_112
(RecA-like DNA recombinase)

Traaww1_113

Traaww1_114

Traaww1_115

Traaww1_116

Traaww1_117

Traaww1_118

Traaww1_119

Traaww1_120

Traaww1_121

Traaww1_122

Traaww1_123

Traaww1_124
(helix-turn-helix DNA binding domain protein)

Traaww1_125

Traaww1_126

Traaww1_127

Traaww1_128

Traaww1_129

Traaww1_130

Traaww1_131

Traaww1_132

Traaww1_133

Traaww1_134

Traaww1_135

Traaww1_136

Traaww1_137

Traaww1_138

Traaww1_139

Traaww1_140

Traaww1_141

Traaww1_142

Traaww1_143

Traaww1_144
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586013
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 25
Pitt Freezer Box Grid# B3
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload