The Actinobacteriophage Database

Mycobacterium phage Phaux

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Detailed Information for Phage Phaux
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Brady Bertagnoli, Paxton Bignell
Year Found	2010
Location Found	Helena, MT USA
Finding Institution	Helena High School
Program	Phage Hunters Integrating Research and Education
From enriched soil sample?	Unknown
Isolation Temperature	Not entered
GPS Coordinates	46 N, 112 W Map
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Apr 28, 2011
Approximate Shotgun Coverage	230
Genome length (bp)	76479
Character of genome ends	3' Sticky Overhang
Overhang Length	9 bases
Overhang Sequence	CGCTTGTCA
GC Content	62.9%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	E
Subcluster	--
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View 244 ABCat Adnama Amao AmericanBeauty Argent26 Asriel BaboJay BadStone Balomoji Barbarian Bask21 Bench BigBubba BilboSwaggins Bruin Buck Cactus ChosenOne ChotaBhai Cjw1 Command613 Contagion Cookies CrystalP Czyszczon1 Daikon DoctorDiddles DrDrey Dumbo Dusk Easy2Say Elite2014 Elph10 Emmina Eureka Filch FireRed Flypotenuse Gage Gator Gemini Glexan Goku GoldenSpark Goldilocks GooberAzure HanKaySha Harella Henry Highbury Holt Hoonter Hopey HufflyPuff Icee IHOP Inca JeTaime Kanye Kimchi Kostya Lilac Lilizi Lilpickle MadamMonkfish Manda Marshmallow Maxxinista Mindy Miniwave Misfit MISSy Moldemort Mosby MPhalcon Murica Murphy Myrale Nala NelitzaMV Nimrod NoSleep OrionPax Paperbeatsrock Pat3 Petra64142 Phaja Pharsalus PhatBacter Phaux Phrux Porky Pumpkin Quallification Rakim Rimmer RiverMonster Saints25 Sassay ShamWow ShereKhan Simpliphy SirDuracell SophKB Sotrice96 Stank Stark StellaBean StolenFromERC Tarkin TBrady12 TeardropMSU Teaspoon Terminus Thresher Tomaszewski Toto Traaww1 Tuco Ukulele Wiggin Willez Xandras xkcd YassJohnny Youngblood
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Morphotype	Siphoviridae
Has been Phamerated?	Yes
Gene List	Click to View Phaux_1 Phaux_2 Phaux_3 Phaux_4 (terminase small subunit) Phaux_5 Phaux_6 Phaux_7 (terminase large subunit) Phaux_8 Phaux_9 (portal protein) Phaux_10 (capsid maturation protease) Phaux_11 (major capsid protein) Phaux_12 Phaux_13 (head-to-tail adaptor) Phaux_14 (head-to-tail stopper) Phaux_15 Phaux_16 (tail terminator) Phaux_17 (major tail subunit) Phaux_18 (tail assembly chaperone) Phaux_19 (tail assembly chaperone) Phaux_20 (HNH endonuclease domain protein) Phaux_21 (tape measure protein) Phaux_22 (minor tail protein) Phaux_23 (minor tail protein) Phaux_24 (minor tail protein) Phaux_25 (minor tail protein) Phaux_26 (D-Ala-D-Ala carboxypeptidase) Phaux_27 Phaux_28 Phaux_29 Phaux_30 Phaux_31 (lysin A) Phaux_32 (holin) Phaux_33 Phaux_34 (lysin B) Phaux_35 Phaux_36 (NrdH-like protein) Phaux_37 (Lsr2) Phaux_38 Phaux_39 Phaux_40 Phaux_41 Phaux_42 Phaux_43 Phaux_44 Phaux_45 Phaux_46 Phaux_47 Phaux_48 Phaux_49 Phaux_50 Phaux_51 Phaux_52 Phaux_53 Phaux_54 (tyrosine integrase) Phaux_55 Phaux_56 Phaux_57 (immunity repressor) Phaux_58 Phaux_59 Phaux_60 (pentapeptide repeat family protein) Phaux_61 Phaux_62 Phaux_63 Phaux_64 Phaux_65 Phaux_66 Phaux_67 Phaux_68 Phaux_69 Phaux_70 Phaux_71 (ERF family ssDNA binding protein) Phaux_72 Phaux_73 Phaux_74 Phaux_75 Phaux_76 Phaux_77 Phaux_78 Phaux_79 (HNH endonuclease domain protein) Phaux_80 Phaux_81 Phaux_82 Phaux_83 (DnaB-like helicase) Phaux_84 Phaux_85 (WhiB family transcription factor) Phaux_86 Phaux_87 Phaux_88 Phaux_89 Phaux_90 (polynucleotide kinase) Phaux_91 Phaux_92 Phaux_93 Phaux_94 (RNA ligase) Phaux_95 Phaux_96 (WhiB) Phaux_97 Phaux_98 Phaux_99 Phaux_100 Phaux_101 (DNA methylase) Phaux_102 (ssDNA binding protein) Phaux_103 (ClpP-like protease) Phaux_104 Phaux_105 Phaux_106 Phaux_107 Phaux_108 Phaux_111 Phaux_112 Phaux_113 Phaux_114 Phaux_115 (DnaQ-like DNA polymerase III subunit) Phaux_116 Phaux_117 (RecA-like DNA recombinase) Phaux_118 Phaux_119 Phaux_120 Phaux_121 Phaux_122 Phaux_123 Phaux_124 Phaux_125 Phaux_126 Phaux_127 Phaux_128 Phaux_129 Phaux_130 Phaux_131 Phaux_132 Phaux_133 Phaux_134 Phaux_135 Phaux_136 Phaux_137 Phaux_138 Phaux_139 Phaux_140 Phaux_141 Phaux_142 Phaux_143 Phaux_144 Phaux_145 Phaux_146 Phaux_147 (HNH endonuclease domain protein)
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	KC748969
Refseq Number	NC_021311
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	2
Pitt Freezer Box Grid#	F7
Available Files
Plaque Picture	Download
EM Picture	Download

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