Detailed Information for Phage Bask21 |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | N. Kubizcki |
Year Found | 2004 |
Location Found | Pittsburgh, PA USA |
Finding Institution | Schenley High School |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.450280 N, 79.954440 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 11, 2011 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Sanger Sequencing |
Genome length (bp) | 74997 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCTTGTCA |
GC Content | 62.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | E |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 147 |
Number of tRNAs | 2 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | JF937091 |
Refseq Number | None yet |
Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
1 |
Pitt Freezer Box Grid# |
B12 |
Available Files |
Virtual Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |