Detailed Information for Phage ChutneyChips |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Colin Lewis |
Year Found | 2025 |
Location Found | Kruger National Park, South Africa |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 24.993333 S, 31.589883 E Map |
Naming Notes | Named after my favorite flavor of chips in South Africa |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 12, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 2611 |
Genome length (bp) | 77846 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCGATCAGCC |
GC Content | 58.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | L |
Subcluster | L4 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | Being Annotated (Expected completion by 3/18/2026) |
Number of Genes | 143 |
Number of tRNAs | 14 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |