The Actinobacteriophage Database

Mycobacterium phage Eureka

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Detailed Information for Phage Eureka
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Abi Tennassie
Year Found	2009
Location Found	Durban, South Africa
Finding Institution	University of Kwazulu-Natal
Program	Mycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?	No
Isolation Temperature	Not entered
GPS Coordinates	29.8587 S, 31.0218 E Map
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Apr 1, 2011
Genome length (bp)	76174
Character of genome ends	3' Sticky Overhang
Overhang Length	9 bases
Overhang Sequence	CGCTTGTCA
GC Content	62.9%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	E
Subcluster	--
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View 244 ABCat Adnama Amao AmericanBeauty Argent26 Asriel BaboJay BadStone Balomoji Barbarian Bask21 Bench BigBubba BilboSwaggins Bruin Buck Cactus ChosenOne ChotaBhai Cjw1 Command613 Contagion Cookies CrystalP Czyszczon1 Daikon DoctorDiddles DrDrey Dumbo Dusk Easy2Say Elite2014 Elph10 Emmina Eureka Filch FireRed Flypotenuse Gage Gator Gemini Glexan Goku GoldenSpark Goldilocks GooberAzure HanKaySha Harella Henry Highbury Holt Hoonter Hopey HufflyPuff Icee IHOP Inca JeTaime Kanye Kimchi Kostya Lilac Lilizi Lilpickle MadamMonkfish Manda Marshmallow Maxxinista Mindy Miniwave Misfit MISSy Moldemort Mosby MPhalcon Murica Murphy Myrale Nala NelitzaMV Nimrod NoSleep OrionPax Paperbeatsrock Pat3 Petra64142 Phaja Pharsalus PhatBacter Phaux Phrux Porky Pumpkin Quallification Rakim Rimmer RiverMonster Saints25 Sassay ShamWow ShereKhan Simpliphy SirDuracell SophKB Sotrice96 Stank Stark StellaBean StolenFromERC Tarkin TBrady12 TeardropMSU Teaspoon Terminus Thresher Tomaszewski Toto Traaww1 Tuco Ukulele Wiggin Willez Xandras xkcd YassJohnny Youngblood
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Morphotype	Siphoviridae
Number of Genes	145
Number of tRNAs	2
Has been Phamerated?	Yes
Gene List	Click to View Eureka_1 Eureka_2 Eureka_3 Eureka_4 Eureka_5 (terminase small subunit) Eureka_6 Eureka_7 Eureka_8 (terminase large subunit) Eureka_9 Eureka_10 (portal protein) Eureka_11 (capsid maturation protease) Eureka_12 (major capsid protein) Eureka_13 Eureka_14 Eureka_15 (head-to-tail adaptor) Eureka_16 (head-to-tail stopper) Eureka_17 Eureka_18 (tail terminator) Eureka_19 (major tail subunit) Eureka_20 (tail assembly chaperone) Eureka_21 (tail assembly chaperone) Eureka_22 (tape measure protein) Eureka_23 (minor tail protein) Eureka_24 (minor tail protein) Eureka_25 (minor tail protein) Eureka_26 (minor tail protein) Eureka_27 (D-Ala-D-Ala carboxypeptidase) Eureka_28 Eureka_29 Eureka_30 Eureka_31 Eureka_32 (lysin A) Eureka_33 (holin) Eureka_34 Eureka_35 (lysin B) Eureka_36 (NrdH) Eureka_37 Eureka_38 Eureka_39 (Lsr2) Eureka_40 Eureka_41 Eureka_42 Eureka_43 Eureka_44 Eureka_45 Eureka_46 Eureka_47 Eureka_48 Eureka_49 Eureka_50 (tyrosine integrase) Eureka_51 Eureka_52 Eureka_53 Eureka_54 Eureka_55 Eureka_56 Eureka_57 Eureka_58 Eureka_59 Eureka_60 Eureka_61 Eureka_62 Eureka_63 Eureka_64 Eureka_65 Eureka_66 Eureka_67 (ssDNA binding protein, ERF family) Eureka_68 Eureka_69 Eureka_70 Eureka_71 Eureka_72 Eureka_73 Eureka_74 Eureka_75 Eureka_76 Eureka_77 Eureka_78 Eureka_79 (DnaB-like helicase) Eureka_80 Eureka_81 (HNH domain protein) Eureka_82 (WhiB family transcription factor) Eureka_83 Eureka_84 Eureka_85 Eureka_86 Eureka_87 (polynucleotide kinase) Eureka_88 Eureka_89 Eureka_90 (RNA ligase) Eureka_91 Eureka_92 (WhiB) Eureka_93 Eureka_94 Eureka_95 Eureka_96 Eureka_97 Eureka_98 (DNA methylase) Eureka_99 (SSB protein) Eureka_100 (ClpP-like protease) Eureka_101 Eureka_102 Eureka_103 Eureka_104 Eureka_105 Eureka_106 Eureka_109 Eureka_110 Eureka_111 Eureka_112 Eureka_113 (DnaQ-like DNA polymerase III subunit) Eureka_114 Eureka_115 (RecA-like DNA recombinase) Eureka_116 Eureka_117 Eureka_118 Eureka_119 Eureka_120 Eureka_121 Eureka_122 Eureka_123 Eureka_124 Eureka_125 Eureka_126 Eureka_127 Eureka_128 Eureka_129 Eureka_130 Eureka_131 Eureka_132 Eureka_133 Eureka_134 Eureka_135 Eureka_136 Eureka_137 Eureka_138 Eureka_139 Eureka_140 Eureka_141 Eureka_142 Eureka_143 Eureka_144 Eureka_145 Eureka_146 Eureka_147
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	JN412590
Refseq Number	None yet
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	1
Pitt Freezer Box Grid#	G7
Available Files
Plaque Picture	Download
EM Picture	Download

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