| Detailed Information for Phage Phaja |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Savannah Sojka |
| Year Found | 2014 |
| Location Found | Orono, ME USA |
| Finding Institution | University of Maine, Honors College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 44.9 N, 68.6 W Map |
| Naming Notes | Austin Powers: Goldmember
One of the characters mispronounces "father", and it sounds like "Fahja". |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 14, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 90 |
| Genome length (bp) | 75685 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCTTGTCA |
| GC Content | 62.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | E |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of Maine, Honors College |
| Annotation Status | In GenBank |
| Plaque Notes | Mostly clear, slightly turbid on the edges |
| Morphotype | Siphoviridae |
| Number of Genes | 149 |
| Number of tRNAs | 2 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH513978 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
1.72x10^10 (High Titer Lysate) |
| Date of SEA Lysate Titering |
Sep 30, 2014 |
| Pitt Freezer Box# |
9 |
| Pitt Freezer Box Grid# |
F6 |
| Available Files |
| GenBank File for Phamerator | Download |