Mycobacterium phage Porky
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Detailed Information for Phage Porky
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByHelen Donis-Keller
Year Found2005
Location FoundConcord, MA USA
Finding InstitutionOlin College of Engineering
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates42.373891 N, 71.109352 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 11, 2008
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodSanger Sequencing
Genome length (bp)76312
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
GC Content63.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes147
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Porky_1

Porky_2

Porky_3

Porky_4

Porky_5
(terminase small subunit)

Porky_6

Porky_7
(terminase large subunit)

Porky_8

Porky_9
(portal protein)

Porky_10
(capsid maturation protease)

Porky_11
(major capsid protein)

Porky_12

Porky_13
(head-to-tail adaptor)

Porky_14
(head-to-tail stopper)

Porky_15

Porky_16
(tail terminator)

Porky_17
(major tail subunit)

Porky_18

Porky_19

Porky_20
(tail assembly chaperone)

Porky_21
(EndoVII)

Porky_22
(tape measure protein)

Porky_23

Porky_24
(minor tail protein)

Porky_25

Porky_26

Porky_27

Porky_28

Porky_29

Porky_30

Porky_31

Porky_32
(lysin A)

Porky_33
(holin)

Porky_34

Porky_35
(lysin B)

Porky_36

Porky_37
(glutaredoxin)

Porky_38
(Lsr2)

Porky_39

Porky_40

Porky_41

Porky_42

Porky_43

Porky_44

Porky_45

Porky_46

Porky_47

Porky_48

Porky_49

Porky_50

Porky_51
(tyrosine integrase)

Porky_52

Porky_53

Porky_54

Porky_55

Porky_56

Porky_57

Porky_58

Porky_59

Porky_60

Porky_61

Porky_62

Porky_63

Porky_64

Porky_65

Porky_66

Porky_67

Porky_68
(ERF family ssDNA binding protein)

Porky_69

Porky_70

Porky_71

Porky_72

Porky_73

Porky_74

Porky_75
(HNHc protein)

Porky_76

Porky_77

Porky_78

Porky_79

Porky_80
(DnaB)

Porky_81

Porky_82
(WhiB family transcription factor)

Porky_83

Porky_84

Porky_85

Porky_86

Porky_87
(polynucleotide kinase)

Porky_88

Porky_89

Porky_90
(RNA ligase)

Porky_91

Porky_92
(WhiB/HNH endonuclease)

Porky_93

Porky_94

Porky_95

Porky_96

Porky_97

Porky_98
(DNA methylase)

Porky_99
(ssDNA binding protein)

Porky_100
(ClpP-like protease)

Porky_101

Porky_102

Porky_103

Porky_104
(HNH endonuclease)

Porky_105 — tRNA
(codon recognized: CAA)

Porky_106 — tRNA
(codon recognized: GGA)

Porky_107

Porky_108

Porky_109
(HNH endonuclease)

Porky_110

Porky_111

Porky_112
(DnaQ-like DNA polymerase III subunit)

Porky_113

Porky_114
(RecA-like DNA recombinase)

Porky_115

Porky_116

Porky_117

Porky_118

Porky_119

Porky_120

Porky_121

Porky_122

Porky_123

Porky_124

Porky_125

Porky_126

Porky_127

Porky_128

Porky_129

Porky_130

Porky_131

Porky_132

Porky_133

Porky_134

Porky_135

Porky_136

Porky_137

Porky_138

Porky_139

Porky_140

Porky_141

Porky_142

Porky_143

Porky_144

Porky_145

Porky_146

Porky_147

Porky_148

Porky_149

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionEU816588
Refseq NumberNC_011055
Archiving Info
Archiving status Archived
Pitt Freezer Box# 2
Pitt Freezer Box Grid# G4
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
EM PictureDownload