The Actinobacteriophage Database

Mycobacterium phage RiverMonster

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Detailed Information for Phage RiverMonster
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Leah Liston
Year Found	2010
Location Found	West Lafayette, IN USA
Finding Institution	Purdue University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	Not entered
GPS Coordinates	40.443439 N, 86.896408 W Map
Discovery Notes	From underwater in a riverbed. 5inches into the bed. Air temperature outside 78 degrees Fahrenheit. 30.71 meters from US 43 on the west bank of the river.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Mar 16, 2012
Genome length (bp)	75565
Character of genome ends	3' Sticky Overhang
Overhang Length	9 bases
Overhang Sequence	CGCTTGTCA
GC Content	63.1%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	E
Subcluster	--
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View 244 ABCat Adnama Amao AmericanBeauty Argent26 Asriel BaboJay BadStone Balomoji Barbarian Bask21 Bench BigBubba BilboSwaggins Bruin Buck BugsBunny Cactus ChosenOne ChotaBhai Cjw1 Command613 Contagion Cookies CrystalP Czyszczon1 Daikon DoctorDiddles DrDrey Dumbo Dusk Easy2Say Elite2014 Elph10 Emmina Eureka Filch FireRed Flypotenuse Gage Gator Gemini Glexan Goku GoldenSpark Goldilocks GooberAzure HanKaySha Harella Henry Highbury Holt Hoonter Hopey HufflyPuff Icee IHOP Inca JeTaime Kanye Kimchi Kostya Lilac Lilizi Lilpickle MadamMonkfish Manda Marshmallow Maxxinista Mindy Miniwave Misfit MISSy Moldemort Mosby MPhalcon Murica Murphy Myrale Nala NelitzaMV Nimrod NoSleep OrionPax Palpatine Paperbeatsrock Pat3 Petra64142 Phaja Pharsalus PhatBacter Phaux Phrux Policronamos Porky Pumpkin Quallification Rakim Rimmer RiverMonster Saints25 Sassay ShamWow ShereKhan Simpliphy SirDuracell SophKB Sotrice96 Stank Stark StellaBean StolenFromERC Tarkin TBrady12 TeardropMSU Teaspoon Terminus Thresher Tomaszewski Toto Traaww1 Tuco Ukulele Wiggin Willez Xandras xkcd YassJohnny Youngblood
Annotating Institution	Purdue University
Annotation Status	In GenBank
Plaque Notes	1.25mm in diameter, clear plaques
Morphotype	Siphoviridae
Number of Genes	144
Number of tRNAs	2
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View RiverMonster_1 RiverMonster_2 RiverMonster_3 RiverMonster_4 RiverMonster_5 (terminase small subunit) RiverMonster_6 RiverMonster_7 RiverMonster_8 (terminase) RiverMonster_9 RiverMonster_10 (portal protein) RiverMonster_11 (capsid maturation protease) RiverMonster_12 (major capsid protein) RiverMonster_13 RiverMonster_14 (head-to-tail adaptor) RiverMonster_15 (head-to-tail stopper) RiverMonster_16 RiverMonster_17 (tail terminator) RiverMonster_18 (major tail protein) RiverMonster_19 RiverMonster_20 (tail assembly chaperone) RiverMonster_21 (tail assembly chaperone) RiverMonster_22 (tape measure protein) RiverMonster_23 (minor tail protein) RiverMonster_24 (minor tail protein) RiverMonster_25 (minor tail protein) RiverMonster_26 (minor tail protein) RiverMonster_27 (minor tail protein) RiverMonster_28 RiverMonster_29 RiverMonster_30 RiverMonster_31 RiverMonster_32 (lysin A) RiverMonster_33 RiverMonster_34 RiverMonster_35 (lysin B) RiverMonster_36 RiverMonster_37 (NrdH-like glutaredoxin) RiverMonster_38 (DNA binding protein) RiverMonster_39 RiverMonster_40 RiverMonster_41 RiverMonster_42 RiverMonster_43 RiverMonster_44 RiverMonster_45 RiverMonster_46 RiverMonster_47 RiverMonster_48 RiverMonster_49 RiverMonster_50 RiverMonster_51 RiverMonster_52 RiverMonster_53 (tyrosine integrase) RiverMonster_54 RiverMonster_55 RiverMonster_56 (immunity repressor) RiverMonster_57 RiverMonster_58 RiverMonster_59 RiverMonster_60 RiverMonster_61 RiverMonster_62 RiverMonster_63 RiverMonster_64 RiverMonster_65 RiverMonster_66 RiverMonster_67 RiverMonster_68 RiverMonster_69 (ERF family ssDNA binding protein) RiverMonster_70 RiverMonster_71 RiverMonster_72 RiverMonster_73 RiverMonster_74 RiverMonster_75 RiverMonster_76 RiverMonster_77 RiverMonster_78 RiverMonster_79 RiverMonster_80 RiverMonster_81 (DnaB-like DNA helicase) RiverMonster_82 RiverMonster_83 (WhiB family transcription factor) RiverMonster_84 RiverMonster_85 RiverMonster_86 RiverMonster_87 RiverMonster_88 (polynucleotide kinase) RiverMonster_89 RiverMonster_90 RiverMonster_91 RiverMonster_92 (RNA ligase) RiverMonster_93 RiverMonster_94 RiverMonster_95 RiverMonster_96 RiverMonster_97 RiverMonster_98 RiverMonster_99 (RNA ligase) RiverMonster_100 RiverMonster_101 (ClpP-like protease) RiverMonster_102 RiverMonster_103 RiverMonster_104 RiverMonster_105 (HNH endonuclease) RiverMonster_106 — tRNA (tRNA-Arg(cct)) RiverMonster_107 — tRNA (tRNA-Gly(tcc)) RiverMonster_108 RiverMonster_109 RiverMonster_110 RiverMonster_111 RiverMonster_112 (DnaQ-like DNA polymerase III subunit) RiverMonster_113 RiverMonster_114 (RecA-like DNA recombinase) RiverMonster_115 RiverMonster_116 RiverMonster_117 RiverMonster_118 RiverMonster_119 RiverMonster_120 RiverMonster_121 RiverMonster_122 RiverMonster_123 RiverMonster_124 RiverMonster_125 RiverMonster_126 RiverMonster_127 RiverMonster_128 RiverMonster_129 RiverMonster_130 RiverMonster_131 RiverMonster_132 RiverMonster_133 RiverMonster_134 RiverMonster_135 RiverMonster_136 RiverMonster_137 RiverMonster_138 RiverMonster_139 RiverMonster_140 RiverMonster_141 RiverMonster_142 RiverMonster_143 RiverMonster_144 RiverMonster_145 RiverMonster_146
Submitted Annotation in DNA Master Format	Download
Submitted Minimal DNA Master File	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MH000607
Refseq Number	None yet
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
SEA Designator	2010PURDrivermonsterLCL
SEA Lysate Titer	9.02e10
Date of SEA Lysate Titering	Oct 27, 2010
Pitt Freezer Box#	16
Pitt Freezer Box Grid#	1
Available Files
Plaque Picture	Download
Restriction Digest Picture	Download
EM Picture	Download
GenBank File for Phamerator	Download

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