Mycobacterium phage ShereKhan
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Detailed Information for Phage ShereKhan
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEnya Childs
Year Found2016
Location FoundOrono, ME USA
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates44.895600 N, 68.673600 W Map
Discovery NotesFound in a flower box, probably came from potting soil
Naming NotesJungle Book character
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 13, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage991
Genome length (bp)76133
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Lysogeny NotesDoes not form stable lysogens
Other Cluster Members
Annotating InstitutionUniversity of Maine, Honors College
Annotation StatusIn GenBank
Plaque NotesClear plaques, two different plaque morphologies
MorphotypeSiphoviridae
Number of Genes143
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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ShereKhan_1

ShereKhan_2

ShereKhan_3

ShereKhan_4

ShereKhan_5

ShereKhan_6
(terminase small subunit)

ShereKhan_7

ShereKhan_8

ShereKhan_9

ShereKhan_10
(terminase large subunit)

ShereKhan_11

ShereKhan_12
(portal protein)

ShereKhan_13
(capsid maturation protease)

ShereKhan_14
(major capsid protein)

ShereKhan_15

ShereKhan_16
(head-to-tail adaptor)

ShereKhan_17
(head-to-tail stopper)

ShereKhan_18

ShereKhan_19
(tail terminator)

ShereKhan_20
(major tail protein)

ShereKhan_21

ShereKhan_22
(tail assembly chaperone)

ShereKhan_23
(tail assembly chaperone)

ShereKhan_24
(tape measure protein)

ShereKhan_25
(minor tail protein)

ShereKhan_26
(minor tail protein)

ShereKhan_27
(minor tail protein)

ShereKhan_28
(minor tail protein)

ShereKhan_29
(D-Ala-D-Ala carboxypeptidase)

ShereKhan_30
(minor tail protein)

ShereKhan_31

ShereKhan_32
(helix-turn-helix DNA binding domain protein)

ShereKhan_33

ShereKhan_34
(lysin A)

ShereKhan_35
(holin)

ShereKhan_36

ShereKhan_37
(lysin B)

ShereKhan_38

ShereKhan_39
(NrdH-like glutaredoxin)

ShereKhan_40
(Lsr2-like DNA bridging protein)

ShereKhan_41

ShereKhan_42

ShereKhan_43

ShereKhan_44

ShereKhan_45

ShereKhan_46

ShereKhan_47

ShereKhan_48

ShereKhan_49

ShereKhan_50
(tyrosine integrase)

ShereKhan_51

ShereKhan_52

ShereKhan_53
(immunity repressor)

ShereKhan_54

ShereKhan_55

ShereKhan_56
(pentapeptide repeat protein)

ShereKhan_57

ShereKhan_58

ShereKhan_59

ShereKhan_60

ShereKhan_61

ShereKhan_62

ShereKhan_63

ShereKhan_64

ShereKhan_65

ShereKhan_66
(exonuclease)

ShereKhan_67

ShereKhan_68
(ERF family ssDNA binding protein)

ShereKhan_69

ShereKhan_70

ShereKhan_71

ShereKhan_72

ShereKhan_73

ShereKhan_74

ShereKhan_75
(DprA-like DNA processing chain A)

ShereKhan_76

ShereKhan_77

ShereKhan_78

ShereKhan_79
(DnaB-like dsDNA helicase)

ShereKhan_80

ShereKhan_81
(WhiB family transcription factor)

ShereKhan_82

ShereKhan_83

ShereKhan_84
(holliday junction resolvase)

ShereKhan_85

ShereKhan_86
(polynucleotide kinase)

ShereKhan_87

ShereKhan_88

ShereKhan_89
(RNA ligase)

ShereKhan_90
(helix-turn-helix DNA binding protein)

ShereKhan_91
(WhiB family transcription factor)

ShereKhan_92

ShereKhan_93

ShereKhan_94

ShereKhan_95

ShereKhan_96

ShereKhan_97
(DNA methylase)

ShereKhan_98
(ssDNA binding protein)

ShereKhan_99
(ClpP-like protease)

ShereKhan_100

ShereKhan_101

ShereKhan_102

ShereKhan_103
(helix-turn-helix DNA binding domain protein)

ShereKhan_104
(HNH endonuclease)

ShereKhan_105 — tRNA
(tRNA-Arg(ctt))

ShereKhan_106 — tRNA
(tRNA-Gly(tcc))

ShereKhan_107

ShereKhan_108

ShereKhan_109
(hydrolase)

ShereKhan_110

ShereKhan_111
(DnaQ-like DNA polymerase III subunit)

ShereKhan_112

ShereKhan_113
(RecA-like DNA recombinase)

ShereKhan_114

ShereKhan_115

ShereKhan_116

ShereKhan_117

ShereKhan_118

ShereKhan_119

ShereKhan_120

ShereKhan_121

ShereKhan_122

ShereKhan_123

ShereKhan_124

ShereKhan_125
(helix-turn-helix DNA binding protein)

ShereKhan_126

ShereKhan_127

ShereKhan_128

ShereKhan_129

ShereKhan_130

ShereKhan_131

ShereKhan_132

ShereKhan_133

ShereKhan_134

ShereKhan_135

ShereKhan_136

ShereKhan_137

ShereKhan_138

ShereKhan_139

ShereKhan_140

ShereKhan_141

ShereKhan_142

ShereKhan_143

ShereKhan_144

ShereKhan_145
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH513983
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 44
Pitt Freezer Box Grid# G1
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload