Detailed Information for Phage SirDuracell |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Peter Nikolai |
Year Found | 2008 |
Location Found | Triad, IL USA |
Finding Institution | Triad High School |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 38.711507 N, 89.773122 W Map |
Discovery Notes | Compost pile in St. Jacob, Illinois Waste from rabbit hutch was added to the pile. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 11, 2011 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Sanger |
Genome length (bp) | 75973 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
GC Content | 62.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | E |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 145 |
Number of tRNAs | 2 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | JF937106 |
Refseq Number | None yet |
Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
3 |
Pitt Freezer Box Grid# |
A3 |
Available Files |
Plaque Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |