Mycobacterium phage Stank
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Detailed Information for Phage Stank
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDavid Kim and James Wheeler
Year Found2023
Location FoundOrono, ME United States
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates44.930277 N, 68.693611 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 31, 2024
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage593
Genome length (bp)75925
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Maine, Honors College
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes148
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Stank_1

Stank_2

Stank_3

Stank_4

Stank_5

Stank_6
(terminase small subunit)

Stank_7

Stank_8

Stank_9

Stank_10
(terminase large subunit)

Stank_11

Stank_12
(portal protein)

Stank_13
(capsid maturation protease)

Stank_14
(major capsid protein)

Stank_15

Stank_16
(head-to-tail adaptor)

Stank_17
(head-to-tail stopper)

Stank_18

Stank_19
(tail terminator)

Stank_20
(major tail protein)

Stank_21
(head fiber protein)

Stank_22
(tail assembly chaperone)

Stank_23
(tail assembly chaperone)

Stank_24
(endonuclease VII)

Stank_25
(tape measure protein)

Stank_26
(minor tail protein)

Stank_27
(minor tail protein)

Stank_28

Stank_29
(minor tail protein)

Stank_30
(minor tail protein)

Stank_31

Stank_32

Stank_33
(helix-turn-helix DNA binding domain)

Stank_34

Stank_35
(lysin A)

Stank_36
(holin)

Stank_37

Stank_38
(lysin B)

Stank_39

Stank_40

Stank_41
(Lsr2-like DNA bridging protein)

Stank_42

Stank_43

Stank_44

Stank_45

Stank_46

Stank_47

Stank_48

Stank_49

Stank_50

Stank_51

Stank_52

Stank_53

Stank_54

Stank_55

Stank_56
(tyrosine integrase)

Stank_57

Stank_58

Stank_59
(immunity repressor)

Stank_60

Stank_61

Stank_62
(pentapeptide repeat protein)

Stank_63

Stank_64

Stank_65

Stank_66

Stank_67

Stank_68

Stank_69

Stank_70
(Cas4 exonuclease)

Stank_71

Stank_72
(ERF family DNA pairing protein)

Stank_73

Stank_74

Stank_75
(SSB protein)

Stank_76

Stank_77

Stank_78

Stank_79
(DprA-like DNA processing chain A)

Stank_80
(HNH endonuclease)

Stank_81

Stank_82

Stank_83

Stank_84
(DnaB-like dsDNA helicase)

Stank_85

Stank_86
(WhiB family transcription factor)

Stank_87

Stank_88

Stank_89
(Holliday junction resolvase)

Stank_90

Stank_91
(polynucleotide kinase)

Stank_92

Stank_93
(RNA ligase)

Stank_94
(helix-turn-helix DNA binding domain)

Stank_95
(WhiB family transcription factor)

Stank_96

Stank_97

Stank_98

Stank_99

Stank_100

Stank_101
(endonuclease VII)

Stank_102
(SSB protein)

Stank_103
(ClpP-like protease)

Stank_104

Stank_105

Stank_106

Stank_107
(helix-turn-helix DNA binding domain)

Stank_108

Stank_109 — tRNA
(tRNA-Arg(cct))

Stank_110 — tRNA
(tRNA-Gly(tcc))

Stank_111

Stank_112

Stank_113
(HNH endonuclease)

Stank_114
(nucleoside deoxyribosyltransferase)

Stank_115

Stank_116
(DnaQ-like DNA polymerase III subunit)

Stank_117

Stank_118
(RecA-like DNA recombinase)

Stank_119

Stank_120

Stank_121

Stank_122

Stank_123

Stank_124

Stank_125

Stank_126

Stank_127

Stank_128

Stank_129

Stank_130
(helix-turn-helix DNA binding domain)

Stank_131

Stank_132

Stank_133

Stank_134

Stank_135

Stank_136

Stank_137

Stank_138

Stank_139

Stank_140

Stank_141

Stank_142

Stank_143

Stank_144

Stank_145

Stank_146

Stank_147

Stank_148

Stank_149

Stank_150
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP750963
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 186
Pitt Freezer Box Grid# G6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload