Detailed Information for Phage Tourach |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Zeph Pendleton |
Year Found | 2018 |
Location Found | Antsirabe, Madagascar |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 19.8633 S, 47.034005 E Map |
Discovery Notes | Enrichment and isolation temperature is at room temperature. |
Naming Notes | Named for the card "hymn to tourach" from magic, the gathering. Magic uses an icosahedron (the same shape as most phages "heads") as a life counter. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 23, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 449 |
Genome length (bp) | 77876 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCGATCAGCC |
GC Content | 58.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | L |
Subcluster | L2 |
Cluster Life Cycle | Temperate |
Lysogeny Notes | Does not form mesas. |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 132 |
Number of tRNAs | 11 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN234228 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
8 |
Pitt Freezer Box Grid# |
D7 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |