| Detailed Information for Phage Vetrix |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Natnael Belay |
| Year Found | 2020 |
| Location Found | Holland, MI United States |
| Finding Institution | Hope College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 37°C |
| GPS Coordinates | 42.791667 N, 86.105 W Map |
| Discovery Notes | The phage was discovered from the soil within a plant base 3 inches deep, there were white particles within the soil. |
| Naming Notes | Vetrix is a scientist from an old show about astrophysics. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 3, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 630 |
| Genome length (bp) | 76520 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCGATCAGCC |
| GC Content | 58.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | L |
| Subcluster | L2 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Hope College |
| Annotation Status | In GenBank |
| Plaque Notes | The plaque seemed somewhat turbid, the size was roughly 1-2mm. |
| Morphotype | Siphoviridae |
| Number of Genes | 129 |
| Number of tRNAs | 11 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OL455899 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
117 |
| Pitt Freezer Box Grid# |
C5 |
| Available Files |
| GenBank File for Phamerator | Download |