Detailed Information for Phage CicholasNage |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Paul Lee |
Year Found | 2017 |
Location Found | Blacksburg, VA USA |
Finding Institution | Virginia Tech |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 37.221 N, 80.419 W Map |
Discovery Notes | Found in the end zone of Lane Stadium of Virginia Tech. |
Naming Notes | This phage is not named after Nicholas Cage, but inspired by him. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 952 |
Genome length (bp) | 71059 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCGAACGGCC |
GC Content | 58.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | L |
Subcluster | L1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Virginia Tech |
Annotation Status | In GenBank |
Plaque Notes | Medium sized, lytic plaques. |
Morphotype | Siphoviridae |
Number of Genes | 118 |
Number of tRNAs | 5 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK310144 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
54 |
Pitt Freezer Box Grid# |
D10 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |