The Actinobacteriophage Database

Mycobacterium phage Finnry

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Detailed Information for Phage Finnry
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Claudia Gold
Year Found	2018
Location Found	Charleston, SC USA
Finding Institution	College of Charleston
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	37°C
GPS Coordinates	32.783445 N, 79.937537 W Map
Discovery Notes	This soil sample was taken from behind the RITA science center. Soil was noticed to be extremely dry and dust-like.
Naming Notes	Finnry comes from my dog's name, Finn. Friends call him Finnry.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 10, 2019
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina Sequencing
Approximate Shotgun Coverage	1492
Genome length (bp)	75632
Character of genome ends	3' Sticky Overhang
Overhang Length	10 bases
Overhang Sequence	TCGATCAGCC
GC Content	59.3%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	L
Subcluster	L3
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View Acquire49 (L1) Appletree2 (L1) AvadaKedavra (L1) Calm (L1) CicholasNage (L1) DirkDirk (L1) Enceladus (L1) Halena (L1) JoeDirt (L1) LeBron (L1) MAckerman (L1) OhShagHennessy (L1) Rose5 (L1) Silverleaf (L1) Tyson (L1) UPIE (L1) Wamburgrxpress (L1) Wyatt2 (L1) Zaria (L1) Archie (L2) Baoshan (L2) Bazzle (L2) BigCheese (L2) BobsGarage (L2) Breezona (L2) Claus (L2) Crossroads (L2) DanBing (L2) DHan (L2) DrSeegs (L2) Faith1 (L2) Finemlucis (L2) Gabriela (L2) Gardann (L2) GuuelaD (L2) Hafay (L2) Itos (L2) Kahlid (L2) Lewan (L2) LilDestine (L2) Loadrie (L2) Miley16 (L2) MkaliMitinis3 (L2) Netyap (L2) Nicholasp3 (L2) Rumpelstiltskin (L2) Sarshaun (L2) Soap141 (L2) Tourach (L2) Vetrix (L2) Wigglewiggle (L2) Wilder (L2) Winky (L2) Zakai (L2) ZhongYanYuan (L2) Bellis (L3) BourbonZero (L3) Clautastrophe (L3) DuncansLeg (L3) Ellson (L3) Finnry (L3) Jobypre (L3) Jubie (L3) Kingsolomon (L3) KirDoubleO7 (L3) Krypton555 (L3) LiyuLake (L3) Lolly9 (L3) Lumos (L3) MiniLon (L3) MiniMac (L3) Moostard (L3) MsGreen (L3) Nicholas (L3) Samty (L3) Snenia (L3) Whirlwind (L3) BrainDrainer (L4) Bromden (L4) Chaser (L4) Douge (L4) Douzhi (L4) DyoEdafos (L4) FarmResident (L4) PYPDinur (L4) Quby (L4) Sheng711 (L4) Aegeus (L5) Baudelaire (L5)
Annotating Institution	College of Charleston
Annotation Status	In GenBank
Plaque Notes	Plaque was noticed to be in high concentration.
Morphotype	Siphoviridae
Number of Genes	130
Number of tRNAs	9
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Finnry_1 Finnry_2 (terminase small subunit) Finnry_3 Finnry_4 Finnry_5 (terminase large subunit) Finnry_6 (portal protein) Finnry_7 (MuF-like minor capsid protein) Finnry_8 (scaffolding protein) Finnry_9 (major capsid protein) Finnry_10 (head-to-tail adaptor) Finnry_11 (head-to-tail stopper) Finnry_12 Finnry_13 (tail terminator) Finnry_14 (major tail protein) Finnry_15 (tail assembly chaperone) Finnry_16 (tail assembly chaperone) Finnry_17 (tape measure protein) Finnry_18 (minor tail protein) Finnry_19 (minor tail protein) Finnry_20 Finnry_21 (minor tail protein) Finnry_22 (minor tail protein) Finnry_23 Finnry_24 Finnry_25 Finnry_26 (lysin A) Finnry_27 (holin) Finnry_28 (lysin B) Finnry_29 Finnry_30 Finnry_31 (NrdH-like glutaredoxin) Finnry_32 Finnry_33 (nucleotidyltransferase) Finnry_34 (Lsr2-like DNA bridging protein) Finnry_35 Finnry_36 (tyrosine integrase) Finnry_37 Finnry_38 (immunity repressor) Finnry_39 (Cro protein) Finnry_40 (excise) Finnry_41 Finnry_42 Finnry_43 Finnry_44 (esterase) Finnry_45 Finnry_46 Finnry_47 Finnry_48 (band-7-like membrane protein) Finnry_139 — tRNA (tRNA-Tyr(gta)) Finnry_49 Finnry_50 Finnry_51 Finnry_52 Finnry_53 Finnry_54 (Ro-like RNA binding protein) Finnry_55 Finnry_56 Finnry_57 Finnry_58 Finnry_59 Finnry_60 Finnry_61 (Cas4 family exonuclease) Finnry_62 (ERF family ssDNA binding protein) Finnry_63 Finnry_64 (ParB-like nuclease domain protein) Finnry_65 Finnry_66 (HNH endonuclease) Finnry_67 Finnry_68 Finnry_69 (DnaB-like dsDNA helicase) Finnry_70 (WhiB family transcription factor) Finnry_71 Finnry_72 Finnry_73 Finnry_74 (phosphoribosyl pyrophosphate transferase) Finnry_75 (nicotinate ribosyltransferase) Finnry_76 (polynucleotide kinase) Finnry_77 Finnry_78 (RusA-like resolvase) Finnry_79 (WhiB family transcription factor) Finnry_80 (WhiB family transcription factor) Finnry_81 Finnry_82 Finnry_83 (ssDNA binding protein) Finnry_84 Finnry_85 Finnry_86 (RNA ligase) Finnry_87 (ClpP-like protease) Finnry_88 Finnry_89 Finnry_90 Finnry_91 (excise) Finnry_92 (HNH endonuclease) Finnry_93 Finnry_94 Finnry_95 (DnaQ-like DNA polymerase III subunit) Finnry_96 Finnry_97 Finnry_98 Finnry_99 (HNH endonuclease) Finnry_100 Finnry_101 Finnry_102 Finnry_103 Finnry_104 — tRNA Finnry_105 Finnry_106 Finnry_107 — tRNA Finnry_108 — tRNA Finnry_109 — tRNA Finnry_110 Finnry_111 — tRNA Finnry_112 — tRNA Finnry_113 Finnry_114 Finnry_115 — tRNA Finnry_116 — tRNA Finnry_117 Finnry_118 Finnry_119 Finnry_120 Finnry_121 Finnry_122 Finnry_123 Finnry_124 Finnry_125 Finnry_126 Finnry_127 Finnry_128 Finnry_129 Finnry_130 Finnry_131 Finnry_132 Finnry_133 (AAA-ATPase) Finnry_134 Finnry_135 Finnry_136 Finnry_137 Finnry_138
Submitted Annotation in DNA Master Format	Download
Submitted Minimal DNA Master File	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MN096377
Refseq Number	None yet
Published in Paper	Byrum et al 2022, Microbiology Resource Announcements: Complete Genome Sequence of Finnry, a Subcluster L3 Mycobacteriophage from Charleston, South Carolina
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	93
Pitt Freezer Box Grid#	D11
Available Files
Plaque Picture	Download
EM Picture	Download
GenBank File for Phamerator	Download

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