Mycobacterium phage Gardann
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| Detailed Information for Phage Gardann | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Georgeanna Holmes |
| Year Found | 2011 |
| Location Found | Suwanee, GA USA |
| Finding Institution | Georgia Gwinnett College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 34.083392 N, 84.067072 W Map |
| Discovery Notes | Compost pile in a garden. 1 inch from surface. dug around 8:30 am. around 80 degrees Fahrenheit. dug on September 20, 2011. elevation 1018 ft. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 4, 2015 |
| Sequencing Facility | Virginia Commonwealth University Nucleic Acids Research Facilities |
| Shotgun Sequencing Method | 454 |
| Sequencer Used | 454 Genome Sequencer FLX |
| Approximate Shotgun Coverage | 40 |
| Sanger Finishing Reactions | 8 |
| Genome length (bp) | 76012 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCGATCAGCC |
| GC Content | 58.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | L |
| Subcluster | L2 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | diameter: .5mm. hazy edges, clear center. pretty much stayed right at .5 mm the whole time except one generation it was .6 mm. |
| Morphotype | Siphoviridae |
| Number of Genes | 126 |
| Number of tRNAs | 14 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KX507361 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Designator | 2011GAGWgardannGH |
| Pitt Freezer Box# | 23 |
| Pitt Freezer Box Grid# | 15 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |