Detailed Information for Phage Itos |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Carlos Guerrero |
Year Found | 2018 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Unavailable |
From enriched soil sample? | Unknown |
Isolation Temperature | 37°C |
GPS Coordinates | 40.4443 N, 79.9532 W Map |
Discovery Notes | Isolated from pooled lysates enrichment with M. abscessus GD08. |
Naming Notes | former designation cg_11 |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 23, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 124 |
Genome length (bp) | 74937 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCGATCAGCC |
GC Content | 58.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | L |
Subcluster | L2 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 134 |
Number of tRNAs | 12 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN703410 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
116 |
Pitt Freezer Box Grid# |
B2 |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |