Mycobacterium phage Kahlid
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Detailed Information for Phage Kahlid
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKahlid Fowlkes
Year Found2016
Location FoundAtlanta, GA USA
Finding InstitutionMorehouse College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates33.748676 N, 84.415321 W Map
Discovery NotesWas chosen on hot day. The temperature was 86 degrees Fahrenheit. The soil was dry. The depth was 3 cm.
Naming NotesMy name is Kahlid and i like my name so much and it is something that is very unique. Plus i want it to be remember exactly by me.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage1580
Genome length (bp)75952
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesPlaques were great in size. Width- 1.207mm, length-1.242mm, and diameter-1.181.
MorphotypeSiphoviridae
Number of Genes129
Number of tRNAs12
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Kahlid_1

Kahlid_2
(terminase small subunit)

Kahlid_3

Kahlid_4
(terminase large subunit)

Kahlid_5
(portal protein)

Kahlid_6
(MuF-like minor capsid protein)

Kahlid_7
(scaffolding protein)

Kahlid_8
(major capsid protein)

Kahlid_9
(head-to-tail adaptor)

Kahlid_10
(head-to-tail stopper)

Kahlid_11

Kahlid_12
(tail terminator)

Kahlid_13
(major tail protein)

Kahlid_14
(tail assembly chaperone)

Kahlid_15
(tail assembly chaperone)

Kahlid_16
(tape measure protein)

Kahlid_17
(minor tail protein)

Kahlid_18
(minor tail protein)

Kahlid_19
(minor tail protein)

Kahlid_20
(minor tail protein)

Kahlid_21

Kahlid_22

Kahlid_23

Kahlid_24
(minor tail protein)

Kahlid_25

Kahlid_26

Kahlid_27
(lysin A)

Kahlid_28
(lysin B)

Kahlid_29

Kahlid_30

Kahlid_31

Kahlid_32
(NrdH-like glutaredoxin)

Kahlid_33

Kahlid_34

Kahlid_35
(nucleotidyltransferase)

Kahlid_36
(Lsr2-like DNA bridging protein)

Kahlid_37

Kahlid_38
(tyrosine integrase)

Kahlid_39

Kahlid_40
(immunity repressor)

Kahlid_41
(Cro protein)

Kahlid_42
(excise)

Kahlid_43

Kahlid_44

Kahlid_45

Kahlid_46

Kahlid_47
(esterase)

Kahlid_48

Kahlid_49

Kahlid_50

Kahlid_51

Kahlid_52

Kahlid_53

Kahlid_54

Kahlid_55
(Ro-like RNA binding protein)

Kahlid_56

Kahlid_57

Kahlid_58

Kahlid_59

Kahlid_60

Kahlid_61
(Cas4 family exonuclease)

Kahlid_62

Kahlid_63
(ERF family ssDNA binding protein)

Kahlid_64

Kahlid_65

Kahlid_66

Kahlid_67

Kahlid_68

Kahlid_69

Kahlid_70
(DnaB-like dsDNA helicase)

Kahlid_71
(WhiB family transcription factor)

Kahlid_72

Kahlid_73

Kahlid_74
(phosphoribosyl pyrophosphate transferase)

Kahlid_75
(nicotinate ribosyltransferase)

Kahlid_76
(polynucleotide kinase)

Kahlid_77

Kahlid_78

Kahlid_79

Kahlid_80
(RusA-like resolvase)

Kahlid_81
(WhiB family transcription factor)

Kahlid_82
(WhiB family transcription factor)

Kahlid_83

Kahlid_84

Kahlid_85
(ssDNA binding protein)

Kahlid_86

Kahlid_87
(RNA ligase)

Kahlid_88

Kahlid_89
(ClpP-like protease)

Kahlid_90

Kahlid_91

Kahlid_92

Kahlid_93

Kahlid_94
(HNH endonuclease)

Kahlid_95

Kahlid_96

Kahlid_97
(DnaQ-like DNA polymerase III subunit)

Kahlid_98

Kahlid_99

Kahlid_100

Kahlid_101
(HNH endonuclease)

Kahlid_102

Kahlid_103

Kahlid_104

Kahlid_105 — tRNA
(tRNA-Thr(cgt))

Kahlid_106

Kahlid_107 — tRNA
(tRNA-Pro(tgg))

Kahlid_108 — tRNA
(tRNA-Trp(cca))

Kahlid_109 — tRNA
(tRNA-Tyr(gta))

Kahlid_110 — tRNA
(tRNA-Leu(tag))

Kahlid_111 — tRNA
(tRNA-His(gtg))

Kahlid_112 — tRNA
(tRNA-Gln(ctg))

Kahlid_113 — tRNA
(tRNA-Gly(tcc))

Kahlid_114

Kahlid_115 — tRNA
(tRNA-Lys(ctt))

Kahlid_116

Kahlid_117

Kahlid_118 — tRNA
(tRNA-Cys(gca))

Kahlid_119

Kahlid_120

Kahlid_121 — tRNA
(tRNA-Asn(gtt))

Kahlid_122

Kahlid_123 — tRNA
(tRNA-Lys(ttt))

Kahlid_124

Kahlid_125

Kahlid_126

Kahlid_127

Kahlid_128

Kahlid_129

Kahlid_130

Kahlid_131

Kahlid_132

Kahlid_133

Kahlid_134

Kahlid_135

Kahlid_136

Kahlid_137

Kahlid_138
(AAA-ATPase)

Kahlid_139

Kahlid_140

Kahlid_141

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586052
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 39
Pitt Freezer Box Grid# H7
Available Files
Plaque PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload