Detailed Information for Phage Zaria |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Philleon Chambers |
Year Found | 2016 |
Location Found | Atlanta, GA USA |
Finding Institution | Morehouse College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 33.746647 N, 84.413939 W Map |
Discovery Notes | PCR Primer cluster assignment: B5 |
Naming Notes | Name after one of Africa's well known Queens |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 6, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1668 |
Genome length (bp) | 74365 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCGAACGGCC |
GC Content | 58.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | L |
Subcluster | L1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Clear, size ranged from 1 mm-2 miller-meters, edge of phage vary in clearness as in visibility of a define edges from lightly fade to clean cut |
Morphotype | Siphoviridae |
Number of Genes | 128 |
Number of tRNAs | 9 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN586023 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
40 |
Pitt Freezer Box Grid# |
A5 |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |