Mycobacterium phage Marshmallow
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Detailed Information for Phage Marshmallow
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByRebecca Weiser
Year Found2010
Location FoundLexington, MA USA
Finding InstitutionLexington High School
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates42.441394 N, 71.232511 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 29, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage726
Genome length (bp)76740
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionConnecticut State Community College Northwestern
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes147
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Marshmallow_1

Marshmallow_2

Marshmallow_3

Marshmallow_4

Marshmallow_5

Marshmallow_6
(terminase small subunit)

Marshmallow_7

Marshmallow_8

Marshmallow_9
(terminase large subunit)

Marshmallow_10

Marshmallow_11
(portal protein)

Marshmallow_12
(capsid maturation protease)

Marshmallow_13
(major capsid protein)

Marshmallow_14

Marshmallow_15
(head-to-tail adaptor)

Marshmallow_16
(head-to-tail stopper)

Marshmallow_17

Marshmallow_18
(tail terminator)

Marshmallow_19
(major tail protein)

Marshmallow_20
(tail assembly chaperone)

Marshmallow_21
(tail assembly chaperone)

Marshmallow_22
(tape measure protein)

Marshmallow_23
(minor tail protein)

Marshmallow_24
(minor tail protein)

Marshmallow_25
(minor tail protein)

Marshmallow_26
(minor tail protein)

Marshmallow_27
(minor tail protein)

Marshmallow_28

Marshmallow_29

Marshmallow_30
(helix-turn-helix DNA binding domain protein)

Marshmallow_31

Marshmallow_32
(lysin A)

Marshmallow_33
(holin)

Marshmallow_34

Marshmallow_35
(lysin B)

Marshmallow_36

Marshmallow_37
(NrdH-like glutaredoxin)

Marshmallow_38
(HNH endonuclease)

Marshmallow_39
(Lsr2-like DNA bridging protein)

Marshmallow_40

Marshmallow_41

Marshmallow_42

Marshmallow_43

Marshmallow_44

Marshmallow_45

Marshmallow_46

Marshmallow_47

Marshmallow_48

Marshmallow_49

Marshmallow_50

Marshmallow_51
(tyrosine integrase)

Marshmallow_52

Marshmallow_53

Marshmallow_54
(immunity repressor)

Marshmallow_55

Marshmallow_56

Marshmallow_57
(pentapeptide repeat protein)

Marshmallow_58

Marshmallow_59

Marshmallow_60

Marshmallow_61

Marshmallow_62

Marshmallow_63

Marshmallow_64

Marshmallow_65
(exonuclease)

Marshmallow_66

Marshmallow_67
(ERF family DNA pairing protein)

Marshmallow_68

Marshmallow_69

Marshmallow_70

Marshmallow_71

Marshmallow_72

Marshmallow_73

Marshmallow_74
(DprA-like DNA processing chain A)

Marshmallow_75
(HNH endonuclease)

Marshmallow_76

Marshmallow_77

Marshmallow_78

Marshmallow_79
(DnaB-like dsDNA helicase)

Marshmallow_80

Marshmallow_81
(WhiB family transcription factor)

Marshmallow_82

Marshmallow_83

Marshmallow_84
(Holliday junction resolvase)

Marshmallow_85

Marshmallow_86
(polynucleotide kinase)

Marshmallow_87

Marshmallow_88

Marshmallow_89
(RNA ligase)

Marshmallow_90
(helix-turn-helix DNA binding domain protein)

Marshmallow_91
(WhiB family transcription factor)

Marshmallow_92

Marshmallow_93

Marshmallow_94

Marshmallow_95
(helix-turn-helix DNA binding domain protein)

Marshmallow_96
(endonuclease VII)

Marshmallow_97
(SSB protein)

Marshmallow_98
(ClpP-like protease)

Marshmallow_99

Marshmallow_100

Marshmallow_101

Marshmallow_102
(helix-turn-helix DNA binding domain protein)

Marshmallow_103
(HNH endonuclease)

Marshmallow_104

Marshmallow_105 — tRNA
(tRNA-Arg(cct))

Marshmallow_106 — tRNA
(tRNA-Gly(tcc))

Marshmallow_107

Marshmallow_108

Marshmallow_109
(HNH endonuclease)

Marshmallow_110
(MazG-like nucleotide pyrophosphohydrolase)

Marshmallow_111

Marshmallow_112
(DnaQ-like DNA polymerase III subunit)

Marshmallow_113

Marshmallow_114

Marshmallow_115

Marshmallow_116

Marshmallow_117
(RecA-like DNA recombinase)

Marshmallow_118

Marshmallow_119

Marshmallow_120

Marshmallow_121

Marshmallow_122

Marshmallow_123

Marshmallow_124

Marshmallow_125

Marshmallow_126

Marshmallow_127

Marshmallow_128

Marshmallow_129
(helix-turn-helix DNA binding domain protein)

Marshmallow_130

Marshmallow_131

Marshmallow_132

Marshmallow_133

Marshmallow_134

Marshmallow_135

Marshmallow_136

Marshmallow_137

Marshmallow_138

Marshmallow_139

Marshmallow_140

Marshmallow_141

Marshmallow_142

Marshmallow_143

Marshmallow_144

Marshmallow_145

Marshmallow_146

Marshmallow_147

Marshmallow_148

Marshmallow_149
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR521082
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 118
Pitt Freezer Box Grid# C1
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload