Detailed Information for Phage AngelCake |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Milani Parikh |
Year Found | 2024 |
Location Found | Merion Station, PA United States |
Finding Institution | Saint Joseph's University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 37°C |
GPS Coordinates | 39.996221 N, 75.240382 W Map |
Discovery Notes | In a dry mulch bed near a metal fence and some small shrubs. Close to a large tree. On a college campus close to dorm buildings. Very minimal foot traffic in that direct area. |
Naming Notes | Our plaques have a halo surrounding the plaque that reminded us of an angel halo. The cake part was just for fun because we both love cake. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 10, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2525 |
Genome length (bp) | 68698 |
Character of genome ends | Circularly Permuted |
GC Content | 66.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Saint Joseph's University |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | Small, clear, and circular plaques about 2mm in size. Surrounded by a turbid halo. The size of the halo extends up to 0.5 mm. All plates were incubated for 48 hours. |
Morphotype | Siphoviridae |
Number of Genes | 98 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |