Mycobacterium phage BirdsNest
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Detailed Information for Phage BirdsNest
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByChristian Gauthier
Year Found2018
Location Found South Africa
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates23.9884 S, 31.5547 E Map
Naming NotesSoil was isolated beneath a birds nest at Kruger National Park in South Africa
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 3, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1253
Genome length (bp)70668
Character of genome endsCircularly Permuted
GC Content70.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB13
Cluster Life CycleLytic
Other Cluster Members

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AbsoluteMadLad (B1)

ABU (B1)

AltPhacts (B1)

Altwerkus (B1)

Antonia (B1)

Apizium (B1)

Ashraf (B1)

Badfish (B1)

Banjo (B1)

BatteryCK (B1)

Beaglebox (B1)

Bishoperium (B1)

BlackStallion (B1)

Boehler (B1)

Buckeye (B1)

CamL (B1)

Cannibal (B1)

Carthage (B1)

Chaelin (B1)

Chah (B1)

CharlieGBrown (B1)

CheetO (B1)

Childish (B1)

Chorkpop (B1)

Chunky (B1)

Cobra (B1)

Colbert (B1)

Cosmolli16 (B1)

Craff (B1)

Crownjwl (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

DirtJuice (B1)

Doddsville (B1)

DoesntMatter (B1)

DonSanchon (B1)

DuchessDung (B1)

Duggie (B1)

Durga (B1)

Emiris (B1)

EmpTee (B1)

Eremos (B1)

Eugenia (B1)

Fang (B1)

FluffyNinja (B1)

FriarPreacher (B1)

Fringe (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Gophee (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

HenryJackson (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Hocus (B1)

Horchata (B1)

HSavage (B1)

ImtiyazSitla (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JakeO (B1)

JangoPhett (B1)

Jillium (B1)

Jiminy (B1)

Kahve (B1)

Kailash (B1)

Keitherie (B1)

Kikipoo (B1)

Kimbrough (B1)

KingTut (B1)

KingVeVeVe (B1)

KlimbOn (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

LeeLot (B1)

Lego3393 (B1)

Legolas (B1)

LemonSlice (B1)

Longacauda (B1)

LuckyMarjie (B1)

Lulumae (B1)

Mag7 (B1)

Mana (B1)

Manad (B1)

Maskar (B1)

Matalotodo (B1)

Mcshane (B1)

Mecca (B1)

Megatron (B1)

Mesh1 (B1)

MichaelPhcott (B1)

Mikota (B1)

MitKao (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Numberten (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Omniscient (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

PG1 (B1)

Phamished (B1)

Phareon (B1)

PhatCats2014 (B1)

PhenghisKhan (B1)

Phergie (B1)

Phipps (B1)

Phleuron (B1)

PhrankReynolds (B1)

PhrodoBaggins (B1)

Phunky (B1)

Piglet (B1)

PinheadLarry (B1)

Pinkman (B1)

Pipsqueak (B1)

Placalicious (B1)

Plmatters (B1)

Podrick (B1)

Pops (B1)

Potter (B1)

Prickles (B1)

ProfessorX (B1)

Puhltonio (B1)

QueenBeane (B1)

RedMaple (B1)

Riggan (B1)

Robyn (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

Samaymay (B1)

SassyCat97 (B1)

Schadenfreude (B1)

Scoot17C (B1)

SDcharge11 (B1)

Serendipity (B1)

Serpentine (B1)

Sheila (B1)

ShiVal (B1)

Sigman (B1)

Skippy (B1)

Slatt (B1)

Solosis (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Squid (B1)

Squiggle (B1)

Struggle (B1)

Suffolk (B1)

Surely (B1)

Swish (B1)

TallGrassMM (B1)

Telesworld (B1)

Thora (B1)

ThreeOh3D2 (B1)

Timmi (B1)

TomBombadil (B1)

Trypo (B1)

TyrionL (B1)

UAch1 (B1)

UncleHowie (B1)

Vaishali24 (B1)

Valjean (B1)

Vaticameos (B1)

Veritas (B1)

Virapocalypse (B1)

Vista (B1)

Vivaldi (B1)

Vortex (B1)

Wallhey (B1)

Waterdiva (B1)

Windsor (B1)

Xavier (B1)

Yoshand (B1)

YouGoGlencoco (B1)

Zaider (B1)

Zelda (B1)

Zonia (B1)

Imvubu (B10)

Indlovu (B11)

LilMcDreamy (B12)

BirdsNest (B13)

Arbiter (B2)

Ares (B2)

Bananafish (B2)

Boyle (B2)

Brownie5 (B2)

Coffee (B2)

Eaglehorse (B2)

Faze9 (B2)

FrenchFry (B2)

Glass (B2)

Godines (B2)

Hedgerow (B2)

Holeinone (B2)

ItsyBitsy1 (B2)

Kheth (B2)

Laurie (B2)

Lephleur (B2)

LizLemon (B2)

Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Sabella (B2)

TA17a (B2)

Tinciduntsolum (B2)

Tres (B2)

West99 (B2)

Abinghost (B3)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Heathcliff (B3)

Jackstina (B3)

Kamiyu (B3)

Marley1013 (B3)

Mortcellus (B3)

Morty007 (B3)

Nozo (B3)

Obutu (B3)

OrangeOswald (B3)

Phaedrus (B3)

Philly (B3)

Phlyer (B3)

Pipefish (B3)

RagingRooster (B3)

Rita1961 (B3)

RomaT (B3)

SynergyX (B3)

Tydolla (B3)

Yahalom (B3)

AlanGrant (B4)

Apex (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Hangman (B4)

JAMaL (B4)

Lolalove (B4)

Magpie (B4)

Mithril (B4)

Nigel (B4)

RawrgerThat (B4)

Stinger (B4)

Vincenzo (B4)

Waleliano (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

Suigeneris (B5)

39HC (B6)

40BC (B6)

Hosp (B6)

Jolie1 (B6)

KayaCho (B6)

Saguaro (B7)

Thonko (B8)

CRB2 (B9)

Quesadilla (B9)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusQC Complete
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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BirdsNest_1

BirdsNest_2

BirdsNest_3

BirdsNest_4

BirdsNest_5
(membrane protein)

BirdsNest_6

BirdsNest_7
(adenylate kinase)

BirdsNest_8
(terminase)

BirdsNest_9
(helix-turn-helix DNA binding domain)

BirdsNest_10
(RuvC-like resolvase)

BirdsNest_11
(membrane protein)

BirdsNest_12
(portal protein)

BirdsNest_13
(capsid maturation protease and MuF-like fusion protein)

BirdsNest_14
(membrane protein)

BirdsNest_15

BirdsNest_16

BirdsNest_17
(major capsid protein)

BirdsNest_18

BirdsNest_19

BirdsNest_20
(membrane protein)

BirdsNest_21

BirdsNest_22
(membrane protein)

BirdsNest_23

BirdsNest_24

BirdsNest_25
(head-to-tail adaptor)

BirdsNest_26

BirdsNest_27

BirdsNest_28

BirdsNest_29

BirdsNest_30
(tape measure protein)

BirdsNest_31
(minor tail protein)

BirdsNest_32
(minor tail protein)

BirdsNest_33
(minor tail protein)

BirdsNest_34
(minor tail protein)

BirdsNest_35

BirdsNest_36

BirdsNest_37

BirdsNest_38

BirdsNest_39

BirdsNest_40

BirdsNest_41

BirdsNest_42

BirdsNest_43

BirdsNest_44

BirdsNest_45
(membrane protein)

BirdsNest_46
(helix-turn-helix DNA binding domain)

BirdsNest_47
(helix-turn-helix DNA binding domain)

BirdsNest_48

BirdsNest_49
(lysin A)

BirdsNest_50
(membrane protein)

BirdsNest_51
(lysin B)

BirdsNest_52

BirdsNest_53
(exonuclease)

BirdsNest_54

BirdsNest_55
(DNA helicase)

BirdsNest_56

BirdsNest_57

BirdsNest_58
(MazG-like nucleotide pyrophosphohydrolase)

BirdsNest_59
(RepA-like helicase)

BirdsNest_60

BirdsNest_61
(DNA polymerase I)

BirdsNest_62

BirdsNest_63

BirdsNest_64

BirdsNest_65

BirdsNest_66
(membrane protein)

BirdsNest_67

BirdsNest_68

BirdsNest_69
(membrane protein)

BirdsNest_70

BirdsNest_71

BirdsNest_72

BirdsNest_73
(membrane protein)

BirdsNest_74

BirdsNest_75

BirdsNest_76

BirdsNest_77

BirdsNest_78
(helix-turn-helix DNA binding protein)

BirdsNest_79

BirdsNest_80

BirdsNest_81

BirdsNest_82

BirdsNest_83
(membrane protein)

BirdsNest_84
(cysteine protease)

BirdsNest_85
(membrane protein)

BirdsNest_86
(RNA polymerase sigma factor)

BirdsNest_87

BirdsNest_88

BirdsNest_89
(HNH endonuclease)

BirdsNest_90

BirdsNest_91

BirdsNest_92

BirdsNest_93
(helix-turn-helix DNA binding domain)

BirdsNest_94

BirdsNest_95

BirdsNest_96

BirdsNest_97

BirdsNest_98

BirdsNest_99

BirdsNest_100

BirdsNest_101

BirdsNest_102

BirdsNest_103

BirdsNest_104

BirdsNest_105

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 8
Pitt Freezer Box Grid# D2
Available Files
GenBank File for PhameratorDownload