Mycobacterium phage Plmatters
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Detailed Information for Phage Plmatters
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Duplicates of this PhageJulesWinnfield, Raju
Found ByTaylor Burroughs
Year Found2016
Location FoundWashington, DC United States of America
Finding InstitutionHoward University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates38.9256 N, 77.0212 W Map
Discovery NotesThis sample was found inside the Greene Stadium at Howard University. It was taken from soil located on the outer edges of the running track, surrounded by dirt and grass. There is light traffic, along with buildings around the area. The soil was collected from 0.5 cm within the dirt. The weather outside was recorded to be 82 degrees Fahrenheit.
Naming NotesI am a firm believer in standing up for people who are underrepresented in society. I applied this to a phrase "Plaque Lives Matter". This is what "Plmatters" stands for.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1915
Genome length (bp)68318
Character of genome endsCircularly Permuted
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Cluster Life CycleLytic
Other Cluster Members

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Alis (None)

Anzano (None)

Azarath (None)

BirdsNest (None)

BlaqueIvy (None)

Cally (None)

Ceci11 (None)

ChrIke (None)

Conway (None)

CptKIRK (None)

DaHileesi (None)

FoxholeBuddy (None)

Indlovu (None)

Kerrigan (None)

LilMcDreamy (None)

Loadofcarp (None)

Mage (None)

Meraxes (None)

Muus (None)

Olive00 (None)

Pallavicini (None)

RoseLilly (None)

SeTi1 (None)

Skye (None)

Themis (None)

TommyBoy (None)

ABU (B1)

Alex (B1)

Alpela (B1)

AltPhacts (B1)

Altwerkus (B1)

Antonia (B1)

Apizium (B1)

ArigunDD10 (B1)

Ashraf (B1)

AstrumP28 (B1)

AyJay1824 (B1)

Badfish (B1)

Banjo (B1)

BatteryCK (B1)

Beaglebox (B1)

BengaliBalla92 (B1)

Beni05 (B1)

Benjamin1706 (B1)

Bishoperium (B1)

BlackStallion (B1)

BRod943 (B1)

Buckeye (B1)

BullsEye (B1)

CamL (B1)

Cannibal (B1)

Carthage (B1)

Ceraveeno (B1)

Chah (B1)

CharlieGBrown (B1)

CheetO (B1)

Childish (B1)

Chorkpop (B1)

Chunky (B1)

Cobra (B1)

Coffean (B1)

Colbert (B1)

Cold1 (B1)

Cosmolli16 (B1)

Cowgirl (B1)

Craff (B1)

Crownjwl (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

Ditto (B1)

Doc (B1)

Doddsville (B1)

DoesntMatter (B1)

DonSanchon (B1)

DuchessDung (B1)

DuffyC (B1)

Durga (B1)

Egahp (B1)

Emiris (B1)

EmmyMG (B1)

EmpTee (B1)

Eremos (B1)

Eugenia (B1)

Fang (B1)

Ferhersher (B1)

FluffyNinja (B1)

Frankicide (B1)

FriarPreacher (B1)

Fringe (B1)

Frogger (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Giddykiddy (B1)

Girly (B1)

Gophee (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

HenryJackson (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Horchata (B1)

HSavage (B1)

ImtiyazSitla (B1)

Inkblot (B1)

IPP (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JakeO (B1)

JangoPhett (B1)

Jbone (B1)

Jillium (B1)

Josephine (B1)

Kahve (B1)

Kailash (B1)

Kat63 (B1)

Keitherie (B1)

Kikipoo (B1)

KingTut (B1)

KingVeVeVe (B1)

KlimbOn (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

Lauryn (B1)

LeeLot (B1)

Legion (B1)

Lego3393 (B1)

Legolas (B1)

LemonSlice (B1)

Lifestyle (B1)

Llorona (B1)

Longacauda (B1)

LoveandHonor (B1)

LuckyMarjie (B1)

Lulumae (B1)

Mag7 (B1)

Maleldil (B1)

Malkin71 (B1)

Mana (B1)

Manad (B1)

Maskar (B1)

Matalotodo (B1)

Mcshane (B1)

Mecca (B1)

Megatron (B1)

Mesh1 (B1)

MichaelPhcott (B1)

Mikota (B1)

Mistert4 (B1)

MitKao (B1)

Morbach (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Novak (B1)

Numberten (B1)

Okooko (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Omniscient (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

Pacos19 (B1)

PDRPv (B1)

Pearsonia (B1)

PG1 (B1)

Phamished (B1)

Phareon (B1)

PhatCats2014 (B1)

PhenghisKhan (B1)

Phergie (B1)

Phipps (B1)

Phleuron (B1)

PhrankReynolds (B1)

PhrodoBaggins (B1)

Phunky (B1)

Pickrel13 (B1)

Piglet (B1)

PinheadLarry (B1)

PinkLady16 (B1)

Pinkman (B1)

Pipsqueak (B1)

Placalicious (B1)

Plmatters (B1)

Podrick (B1)

Pops (B1)

Potter (B1)

Prann (B1)

ProfessorX (B1)

Puhltonio (B1)

PuraVida (B1)

Pyro (B1)

QueenBeane (B1)

RedMaple (B1)

Riggan (B1)

Robyn (B1)

Rolex (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

Samaymay (B1)

SassyCat97 (B1)

Schadenfreude (B1)

Scoot17C (B1)

Scooterbug (B1)

SDcharge11 (B1)

Serendipity (B1)

Serpentine (B1)

Sheila (B1)

ShinyBen (B1)

ShiVal (B1)

Sigman (B1)

Solosis (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Speckles (B1)

Squid (B1)

Squiggle (B1)

Squirt12 (B1)

Steve27 (B1)

Struggle (B1)

Suffolk (B1)

Surely (B1)

Swish (B1)

TallGrassMM (B1)

Thora (B1)

ThreeOh3D2 (B1)

Tigris (B1)

Timmi (B1)

TomBombadil (B1)

Tre (B1)

Trypo (B1)

TyrionL (B1)

UAch1 (B1)

Ulysses2016 (B1)

UncleHowie (B1)

Vaishali24 (B1)

Valjean (B1)

Vaticameos (B1)

Veritas (B1)

Virapocalypse (B1)

Vista (B1)

Vivaldi (B1)

Vivamus (B1)

Vortex (B1)

Wallhey (B1)

Waterdiva (B1)

Wunderlich (B1)

Xavier (B1)

Yoshand (B1)

YouGoGlencoco (B1)

Ypsitucky (B1)

Zaider (B1)

Zelda (B1)

Zonia (B1)

Arbiter (B2)

Ares (B2)

Boyle (B2)

Brownie5 (B2)

Coffee (B2)

Eaglehorse (B2)

Faze9 (B2)

FrenchFry (B2)

Glass (B2)

Godines (B2)

Hedgerow (B2)

Holeinone (B2)

ItsyBitsy1 (B2)

Julius (B2)

Kheth (B2)

Laurie (B2)

Lephleur (B2)

LizLemon (B2)

Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Sabella (B2)

TA17a (B2)

Tinciduntsolum (B2)

Tres (B2)

West99 (B2)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

CharlesTrout (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Giraffey (B3)

Gulsi (B3)

Heathcliff (B3)

Jackstina (B3)

Kamiyu (B3)

Littleengine (B3)

Marley1013 (B3)

Mortcellus (B3)

Morty007 (B3)

Nozo (B3)

OrangeOswald (B3)

Phaedrus (B3)

Phlyer (B3)

Pipefish (B3)

RagingRooster (B3)

RomaT (B3)

SassBadger (B3)

Tydolla (B3)

Yahalom (B3)

Zollars18 (B3)

Adawi (B4)

AlanGrant (B4)

Apex (B4)

Bane1 (B4)

Bane2 (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Halloween (B4)

Hangman (B4)

JAMaL (B4)

LeapingLizzy (B4)

Mithril (B4)

Nigel (B4)

Paliothales9 (B4)

RawrgerThat (B4)

Skruzzles (B4)

Stinger (B4)

TheRipper (B4)

Tvorc (B4)

Vincenzo (B4)

Waleliano (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

39HC (B6)

40BC (B6)

Hosp (B6)

Jolie1 (B6)

KayaCho (B6)

Larry28 (B7)

Saguaro (B7)

Tapir (B7)

Thonko (B8)

Annotation StatusIn GenBank
Plaque NotesThe phages are temperate, and ususally range from about 1-2 mm.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Plmatters_1
(adenylate kinase)

Plmatters_2
(terminase)

Plmatters_3

Plmatters_4

Plmatters_5

Plmatters_6
(RuvC-like resolvase)

Plmatters_7

Plmatters_8
(portal protein)

Plmatters_9
(capsid maturation protease and MuF-like fusion protein)

Plmatters_10

Plmatters_11

Plmatters_12
(major capsid protein)

Plmatters_13

Plmatters_14

Plmatters_15
(membrane protein)

Plmatters_16
(membrane protein)

Plmatters_17
(membrane protein)

Plmatters_18
(major tail protein)

Plmatters_19

Plmatters_20
(queuine tRNA-ribosyltransferase)

Plmatters_21

Plmatters_22
(head-to-tail adaptor)

Plmatters_23

Plmatters_24

Plmatters_25
(tail assembly chaperone)

Plmatters_26

Plmatters_27

Plmatters_28
(tape measue protein)

Plmatters_29
(minor tail protein)

Plmatters_30
(minor tail protein)

Plmatters_31
(minor tail protein)

Plmatters_32
(minor tail protein)

Plmatters_33
(minor tail protein)

Plmatters_34

Plmatters_35

Plmatters_36

Plmatters_37

Plmatters_38

Plmatters_39

Plmatters_40

Plmatters_41

Plmatters_42

Plmatters_43

Plmatters_44
(membrane protein)

Plmatters_45
(helix-turn-helix DNA binding domain)

Plmatters_46
(helix-turn-helix DNA binding domain)

Plmatters_47

Plmatters_48
(lysin A)

Plmatters_49
(lysin B)

Plmatters_50

Plmatters_51

Plmatters_52
(DNA helicase)

Plmatters_53

Plmatters_54

Plmatters_55

Plmatters_56

Plmatters_57
(DNA primase/polymerase)

Plmatters_58

Plmatters_59
(DNA polymerase I)

Plmatters_60

Plmatters_61

Plmatters_62

Plmatters_63

Plmatters_64

Plmatters_65

Plmatters_66

Plmatters_67

Plmatters_68
(helix-turn-helix DNA binding domain)

Plmatters_69

Plmatters_70

Plmatters_71

Plmatters_72

Plmatters_73
(HNH endonuclease)

Plmatters_74

Plmatters_75

Plmatters_76

Plmatters_77

Plmatters_78

Plmatters_79

Plmatters_80

Plmatters_81

Plmatters_82
(HNH endonuclease)

Plmatters_83

Plmatters_84

Plmatters_85

Plmatters_86

Plmatters_87

Plmatters_88

Plmatters_89

Plmatters_90

Plmatters_91

Plmatters_92

Plmatters_93

Plmatters_94

Plmatters_95
(membrane protein)

Plmatters_96

Plmatters_97

Plmatters_98

Plmatters_99

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK279871
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.4 x 10^11
Date of SEA Lysate Titering Oct 17, 2016
Pitt Freezer Box# 44
Pitt Freezer Box Grid# C6
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload