Detailed Information for Phage Lopsy |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Edith Machowski |
Year Found | 2022 |
Location Found | Estcourt, South Africa |
Finding Institution | University of the Witwatersrand |
Program | Unavailable |
From enriched soil sample? | No |
Isolation Temperature | 37°C |
GPS Coordinates | 28.924936 S, 29.780057 E Map |
Discovery Notes | Lopsy was found in moist soil between clumps of aloes, approximately 20 cm under fallen leaves. |
Naming Notes | Lopsy is a nickname for pet dog named Penelope. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 20, 2022 |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 637 |
Genome length (bp) | 68451 |
Character of genome ends | Circularly Permuted |
GC Content | 66.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Smooth, clear plaques. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OQ685900 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |