Detailed Information for Phage RedMaple |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Rixon Campbell, Tkeyah Harvey |
Year Found | 2016 |
Location Found | Greensboro, NC USA |
Finding Institution | North Carolina A&T State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 36.08 N, 79.7706 W Map |
Discovery Notes | This plaque was found under a red maple tree on September 2016 |
Naming Notes | The name was after the location of the phage being found |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 21, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 273 |
Genome length (bp) | 68985 |
Character of genome ends | Circularly Permuted |
GC Content | 66.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | The plaque has a round shape when isolated and also have could specs by its surrounding borders. |
Morphotype | Siphoviridae |
Number of Genes | 100 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK279904 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.67E10 |
Date of SEA Lysate Titering |
Nov 15, 2016 |
Pitt Freezer Box# |
30 |
Pitt Freezer Box Grid# |
G12 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |