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Mycobacterium phage JakeO
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Detailed Information for Phage JakeO
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAlexis Fosmer
Year Found2017
Location FoundLincoln, NE USA
Finding InstitutionUniversity of Nebraska-Lincoln
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.820779 N, 96.696556 W Map
Discovery NotesAverage tail length is 267.75 nm
Average capsid diameter is 62 nm
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 2, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1181
Genome length (bp)68341
Character of genome endsCircularly Permuted
Overhang Length68341 bases
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Cluster Life CycleLytic
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Antonia (B1)

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Ashraf (B1)

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Chah (B1)

CharlieGBrown (B1)

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Childish (B1)

Chorkpop (B1)

Chunky (B1)

Cobra (B1)

Colbert (B1)

Cosmolli16 (B1)

Craff (B1)

Crownjwl (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

Doddsville (B1)

DoesntMatter (B1)

DonSanchon (B1)

DuchessDung (B1)

Duggie (B1)

Durga (B1)

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EmpTee (B1)

Eremos (B1)

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Fang (B1)

FluffyNinja (B1)

FriarPreacher (B1)

Fringe (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Gophee (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

HenryJackson (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Hocus (B1)

Horchata (B1)

HSavage (B1)

ImtiyazSitla (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JakeO (B1)

JangoPhett (B1)

Jillium (B1)

Jiminy (B1)

Kahve (B1)

Kailash (B1)

Keitherie (B1)

Kikipoo (B1)

KingTut (B1)

KingVeVeVe (B1)

KlimbOn (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

LeeLot (B1)

Lego3393 (B1)

Legolas (B1)

LemonSlice (B1)

Longacauda (B1)

LuckyMarjie (B1)

Lulumae (B1)

Mag7 (B1)

Mana (B1)

Manad (B1)

Maskar (B1)

Matalotodo (B1)

Mcshane (B1)

Mecca (B1)

Megatron (B1)

Mesh1 (B1)

MichaelPhcott (B1)

Mikota (B1)

MitKao (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Numberten (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Omniscient (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

PG1 (B1)

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PhatCats2014 (B1)

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Plmatters (B1)

Podrick (B1)

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Prickles (B1)

ProfessorX (B1)

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QueenBeane (B1)

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Riggan (B1)

Robyn (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

Samaymay (B1)

SassyCat97 (B1)

Schadenfreude (B1)

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SDcharge11 (B1)

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Serpentine (B1)

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Sigman (B1)

Skippy (B1)

Solosis (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Squid (B1)

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Struggle (B1)

Suffolk (B1)

Surely (B1)

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Timmi (B1)

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UAch1 (B1)

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Brownie5 (B2)

Coffee (B2)

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Kheth (B2)

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Lephleur (B2)

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Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Sabella (B2)

TA17a (B2)

Tinciduntsolum (B2)

Tres (B2)

West99 (B2)

Abinghost (B3)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Heathcliff (B3)

Jackstina (B3)

Kamiyu (B3)

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Morty007 (B3)

Nozo (B3)

Obutu (B3)

OrangeOswald (B3)

Phaedrus (B3)

Philly (B3)

Phlyer (B3)

Pipefish (B3)

RagingRooster (B3)

Rita1961 (B3)

RomaT (B3)

SynergyX (B3)

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Yahalom (B3)

AlanGrant (B4)

Apex (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Hangman (B4)

JAMaL (B4)

Lolalove (B4)

Magpie (B4)

Mithril (B4)

Nigel (B4)

RawrgerThat (B4)

Stinger (B4)

Vincenzo (B4)

Waleliano (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

39HC (B6)

40BC (B6)

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Jolie1 (B6)

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CRB2 (B9)

Quesadilla (B9)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

JakeO_1
(adenylate kinase)

JakeO_2
(terminase)

JakeO_3

JakeO_4

JakeO_5

JakeO_6
(RuvC-like resolvase)

JakeO_7
(membrane protein)

JakeO_8
(portal protein)

JakeO_9
(capsid maturation protease and MuF-like fusion protein)

JakeO_10

JakeO_11
(major capsid protein)

JakeO_12

JakeO_13

JakeO_14
(membrane protein)

JakeO_15
(membrane protein)

JakeO_16
(membrane protein)

JakeO_17
(major tail protein)

JakeO_18

JakeO_19
(queuine tRNA-ribosyltransferase)

JakeO_20

JakeO_21
(head-to-tail adaptor)

JakeO_22

JakeO_23

JakeO_24
(tail assembly chaperone)

JakeO_25

JakeO_26

JakeO_27
(tape measure protein)

JakeO_28
(minor tail protein)

JakeO_29
(minor tail protein)

JakeO_30
(minor tail protein)

JakeO_31
(minor tail protein)

JakeO_32
(minor tail protein)

JakeO_33

JakeO_34

JakeO_35

JakeO_36

JakeO_37

JakeO_38

JakeO_39

JakeO_40

JakeO_41

JakeO_42

JakeO_43
(membrane protein)

JakeO_44
(helix-turn-helix DNA binding domain protein)

JakeO_45
(helix-turn-helix DNA binding domain protein)

JakeO_46

JakeO_47
(lysin A)

JakeO_48
(lysin B)

JakeO_49

JakeO_50

JakeO_51
(DNA helicase)

JakeO_52

JakeO_53

JakeO_54

JakeO_55

JakeO_56

JakeO_57

JakeO_58
(DNA primase/polymerase)

JakeO_59

JakeO_60

JakeO_61
(DNA polymerase I)

JakeO_62

JakeO_63

JakeO_64

JakeO_65

JakeO_66

JakeO_67

JakeO_68

JakeO_69

JakeO_70

JakeO_71
(helix-turn-helix DNA binding protein)

JakeO_72

JakeO_73

JakeO_74

JakeO_75

JakeO_76
(HNH endonuclease)

JakeO_77

JakeO_78

JakeO_79

JakeO_80

JakeO_81

JakeO_82

JakeO_83

JakeO_84

JakeO_85
(HNH endonuclease)

JakeO_86

JakeO_87

JakeO_88

JakeO_89

JakeO_90

JakeO_91

JakeO_92

JakeO_93

JakeO_94

JakeO_95

JakeO_96

JakeO_97

JakeO_98

JakeO_99
(membrane protein)

JakeO_100

JakeO_101

JakeO_102

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK279858
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 65
Pitt Freezer Box Grid# H3
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload