Detailed Information for Phage Sigman |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Kaitlin Price |
Year Found | 2011 |
Location Found | USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.442802 N, 79.962841 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Nov 13, 2013 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Ion Torrent Sequencing |
Approximate Shotgun Coverage | 645 |
Genome length (bp) | 68311 |
Character of genome ends | Circularly Permuted |
GC Content | 66.5% |
Sequencing Notes | Assembled from PGM runs 81 and RaSiBl |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | migrating plaque |
Morphotype | Siphoviridae |
Number of Genes | 101 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KP027209 |
Refseq Number | None yet |
Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
3 |
Pitt Freezer Box Grid# |
G1 |
Available Files |
Plaque Picture | Download |
Final DNAMaster File | Download |