Mycobacterium phage Giraffe
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Detailed Information for Phage Giraffe
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKate Lowrey and Alyssa Christoffer
Year Found2014
Location FoundWest Lafayette, IN USA
Finding InstitutionPurdue University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.421344 N, 86.922364 E Map
Discovery Notes2cm deep
moist soil
Landscape Garden
Naming NotesIt has a very Long tail so we decided it was best depicted by a giraffe

Re-amplified and purified in 2020 by Maansi Asthana, Anita Gopalrathnam, Victoria Granat, David Schaeper, Holly Weilbaker, Brendan Williams
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1072
Genome length (bp)68869
Character of genome endsCircularly Permuted
GC Content66.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Cluster Life CycleLytic
Other Cluster Members

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AbsoluteMadLad (B1)

ABU (B1)

Adriana (B1)

Aelin (B1)

AltPhacts (B1)

Altwerkus (B1)

Anderson (B1)

Andre (B1)

Antonia (B1)

Apizium (B1)

Ashraf (B1)

Badfish (B1)

Banjo (B1)

BatteryCK (B1)

Beaglebox (B1)

Bishoperium (B1)

BlackStallion (B1)

Bluephacebaby (B1)

Boehler (B1)

Buckeye (B1)

Burr (B1)

CamL (B1)

Cannibal (B1)

Carthage (B1)

Chaelin (B1)

Chah (B1)

Charles1 (B1)

CharlieGBrown (B1)

CheetO (B1)

Cher (B1)

Childish (B1)

Chorkpop (B1)

Chunky (B1)

Cobra (B1)

Colbert (B1)

Cosmolli16 (B1)

Craff (B1)

Crownjwl (B1)

DaddyDaniels (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

DirtJuice (B1)

Doddsville (B1)

DoesntMatter (B1)

DonSanchon (B1)

DuchessDung (B1)

Duggie (B1)

Durga (B1)

Emiris (B1)

EmpTee (B1)

Eremos (B1)

Eugenia (B1)

Fang (B1)

FluffyNinja (B1)

Freya (B1)

FriarPreacher (B1)

Fringe (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Giraffe (B1)

Gophee (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

HenryJackson (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Hocus (B1)

Horchata (B1)

HSavage (B1)

ImtiyazSitla (B1)

Inchworm (B1)

Inverness (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JakeO (B1)

JangoPhett (B1)

Jillium (B1)

Jiminy (B1)

Kahve (B1)

Kailash (B1)

Katniss (B1)

Keitherie (B1)

Kikipoo (B1)

Kimbrough (B1)

KingTut (B1)

KingVeVeVe (B1)

KlimbOn (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

LeeLot (B1)

Lego3393 (B1)

Legolas (B1)

LeiMonet (B1)

LemonSlice (B1)

Longacauda (B1)

LuckyMarjie (B1)

Lulumae (B1)

Lulwa (B1)

Mag7 (B1)

Magic8 (B1)

Mana (B1)

Manad (B1)

Maru (B1)

Maskar (B1)

Matalotodo (B1)

Mcshane (B1)

Mecca (B1)

Megatron (B1)

Mesh1 (B1)

MichaelPhcott (B1)

Mikota (B1)

MitKao (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Nicole21 (B1)

Numberten (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Omniscient (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

PG1 (B1)

Phamished (B1)

Phareon (B1)

PhatCats2014 (B1)

PhenghisKhan (B1)

Pherdinand (B1)

Phergie (B1)

Phipps (B1)

Phleuron (B1)

PhrankReynolds (B1)

PhrodoBaggins (B1)

Phunky (B1)

Piglet (B1)

PinheadLarry (B1)

Pinkman (B1)

Pipsqueak (B1)

Placalicious (B1)

Plmatters (B1)

Podrick (B1)

Pops (B1)

Potter (B1)

Prickles (B1)

ProfessorX (B1)

Puhltonio (B1)

QueenBeane (B1)

RedMaple (B1)

Riggan (B1)

Robyn (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

Samaymay (B1)

SassyCat97 (B1)

Schadenfreude (B1)

Scoot17C (B1)

SDcharge11 (B1)

Serendipity (B1)

Serpentine (B1)

Sheila (B1)

ShiVal (B1)

Sigman (B1)

Skippy (B1)

Slatt (B1)

Solosis (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Squid (B1)

Squiggle (B1)

Struggle (B1)

Suffolk (B1)

Surely (B1)

Swish (B1)

TallGrassMM (B1)

Telesworld (B1)

Thora (B1)

ThreeOh3D2 (B1)

Timmi (B1)

TomBombadil (B1)

Tomlarah (B1)

True (B1)

Trypo (B1)

TyrionL (B1)

UAch1 (B1)

UncleHowie (B1)

Vaishali24 (B1)

Valjean (B1)

Vaticameos (B1)

Veritas (B1)

Virapocalypse (B1)

Vista (B1)

Vivaldi (B1)

Vortex (B1)

Wallhey (B1)

Waterdiva (B1)

Weher20 (B1)

Windsor (B1)

Xavier (B1)

Yoshand (B1)

YouGoGlencoco (B1)

Zaider (B1)

Zelda (B1)

Zonia (B1)

Imvubu (B10)

Indlovu (B11)

LilMcDreamy (B12)

BirdsNest (B13)

Zenteno07 (B13)

Allegro (B2)

Arbiter (B2)

Ares (B2)

Bananafish (B2)

Blocker23 (B2)

Boyle (B2)

Brownie5 (B2)

Calamitous (B2)

Coffee (B2)

Eaglehorse (B2)

Faze9 (B2)

FrenchFry (B2)

Glass (B2)

Godines (B2)

Hedgerow (B2)

Holeinone (B2)

ItsyBitsy1 (B2)

Kheth (B2)

Lars (B2)

Laurie (B2)

Lephleur (B2)

LizLemon (B2)

MasterPo (B2)

Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Sabella (B2)

TA17a (B2)

Tinciduntsolum (B2)

Tres (B2)

West99 (B2)

Abinghost (B3)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Gervas (B3)

GlenHope (B3)

HarveySr (B3)

Heathcliff (B3)

Jackstina (B3)

Kamiyu (B3)

LestyG (B3)

Marley1013 (B3)

Mortcellus (B3)

Morty007 (B3)

Neos5 (B3)

Nozo (B3)

Obutu (B3)

OrangeOswald (B3)

Phaedrus (B3)

Philly (B3)

Phlyer (B3)

Pipefish (B3)

RagingRooster (B3)

Rita1961 (B3)

RomaT (B3)

SynergyX (B3)

Tydolla (B3)

Yahalom (B3)

Yinz (B3)

AlanGrant (B4)

Apex (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Hangman (B4)

Heath (B4)

Hydro (B4)

JAMaL (B4)

Lolalove (B4)

Magpie (B4)

Mithril (B4)

Nigel (B4)

Prince (B4)

RawrgerThat (B4)

Stinger (B4)

Vincenzo (B4)

VioletZ (B4)

Waleliano (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

Suigeneris (B5)

39HC (B6)

40BC (B6)

Hosp (B6)

Jolie1 (B6)

KayaCho (B6)

Saguaro (B7)

Thonko (B8)

CRB2 (B9)

Knocker (B9)

PenguinLover67 (B9)

Quesadilla (B9)

Annotating InstitutionPurdue University
Annotation StatusAwaiting_QC
Plaque NotesThe plaque that was captured at Discovery Learning Research Center is a phage that forms plaques with an average diameter of 4mm. The plaques are very clear which indicates the phage induces lysis of its host. The phage grows rapidly and often takes over the plate, when it is in a concentrated area the plaque’s diameter decreases because of space constraints.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Giraffe_Draft_1

Giraffe_Draft_2

Giraffe_Draft_3

Giraffe_Draft_4

Giraffe_Draft_5

Giraffe_Draft_6

Giraffe_Draft_7

Giraffe_Draft_8

Giraffe_Draft_9

Giraffe_Draft_10

Giraffe_Draft_11

Giraffe_Draft_12

Giraffe_Draft_13

Giraffe_Draft_14

Giraffe_Draft_15

Giraffe_Draft_16

Giraffe_Draft_17

Giraffe_Draft_18

Giraffe_Draft_19

Giraffe_Draft_20

Giraffe_Draft_21

Giraffe_Draft_22

Giraffe_Draft_23

Giraffe_Draft_24

Giraffe_Draft_25

Giraffe_Draft_26

Giraffe_Draft_27

Giraffe_Draft_28

Giraffe_Draft_29

Giraffe_Draft_30

Giraffe_Draft_31

Giraffe_Draft_32

Giraffe_Draft_33

Giraffe_Draft_34

Giraffe_Draft_35

Giraffe_Draft_36

Giraffe_Draft_37

Giraffe_Draft_38

Giraffe_Draft_39

Giraffe_Draft_40

Giraffe_Draft_41

Giraffe_Draft_42

Giraffe_Draft_43

Giraffe_Draft_44

Giraffe_Draft_45

Giraffe_Draft_46

Giraffe_Draft_47

Giraffe_Draft_48

Giraffe_Draft_49

Giraffe_Draft_50

Giraffe_Draft_51

Giraffe_Draft_52

Giraffe_Draft_53

Giraffe_Draft_54

Giraffe_Draft_55

Giraffe_Draft_56

Giraffe_Draft_57

Giraffe_Draft_58

Giraffe_Draft_59

Giraffe_Draft_60

Giraffe_Draft_61

Giraffe_Draft_62

Giraffe_Draft_63

Giraffe_Draft_64

Giraffe_Draft_65

Giraffe_Draft_66

Giraffe_Draft_67

Giraffe_Draft_68

Giraffe_Draft_69

Giraffe_Draft_70

Giraffe_Draft_71

Giraffe_Draft_72

Giraffe_Draft_73

Giraffe_Draft_74

Giraffe_Draft_75

Giraffe_Draft_76

Giraffe_Draft_77

Giraffe_Draft_78

Giraffe_Draft_79

Giraffe_Draft_80

Giraffe_Draft_81

Giraffe_Draft_82

Giraffe_Draft_83

Giraffe_Draft_84

Giraffe_Draft_85

Giraffe_Draft_86

Giraffe_Draft_87

Giraffe_Draft_88

Giraffe_Draft_89

Giraffe_Draft_90

Giraffe_Draft_91

Giraffe_Draft_92

Giraffe_Draft_93

Giraffe_Draft_94

Giraffe_Draft_95

Giraffe_Draft_96

Giraffe_Draft_97

Giraffe_Draft_98

Giraffe_Draft_99

Giraffe_Draft_100

Giraffe_Draft_101

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.9x10^9
Pitt Freezer Box# 12
Pitt Freezer Box Grid# A5
Available Files
Plaque PictureDownload
EM PictureDownload