Mycobacterium phage Vaishali24
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Detailed Information for Phage Vaishali24
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesVaishaliVSM24
Found BySaroha Vaishali
Year Found2012
Location FoundMurthial, Sonipat, India
Finding InstitutionJames Madison University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates29.0301 N, 77.0708 E Map
Naming NotesNamed for one of the students who discovered it.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 19, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Genome length (bp)68398
Character of genome endsUnknown
GC Content66.6%
Sequencing Notesbetween 32762 - 32766 bp 40% reads contain string 4 T's instead of consensus 3 T's
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Cluster Life CycleLytic
Other Cluster Members

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AbsoluteMadLad (B1)

ABU (B1)

AltPhacts (B1)

Altwerkus (B1)

Antonia (B1)

Apizium (B1)

Ashraf (B1)

Badfish (B1)

Banjo (B1)

BatteryCK (B1)

Beaglebox (B1)

Bishoperium (B1)

BlackStallion (B1)

Boehler (B1)

Buckeye (B1)

CamL (B1)

Cannibal (B1)

Carthage (B1)

Chah (B1)

CharlieGBrown (B1)

CheetO (B1)

Childish (B1)

Chorkpop (B1)

Chunky (B1)

Cobra (B1)

Colbert (B1)

Cosmolli16 (B1)

Craff (B1)

Crownjwl (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

Doddsville (B1)

DoesntMatter (B1)

DonSanchon (B1)

DuchessDung (B1)

Duggie (B1)

Durga (B1)

Emiris (B1)

EmpTee (B1)

Eremos (B1)

Eugenia (B1)

Fang (B1)

FluffyNinja (B1)

FriarPreacher (B1)

Fringe (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Gophee (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

HenryJackson (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Hocus (B1)

Horchata (B1)

HSavage (B1)

ImtiyazSitla (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JakeO (B1)

JangoPhett (B1)

Jillium (B1)

Jiminy (B1)

Kahve (B1)

Kailash (B1)

Keitherie (B1)

Kikipoo (B1)

KingTut (B1)

KingVeVeVe (B1)

KlimbOn (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

LeeLot (B1)

Lego3393 (B1)

Legolas (B1)

LemonSlice (B1)

Longacauda (B1)

LuckyMarjie (B1)

Lulumae (B1)

Mag7 (B1)

Mana (B1)

Manad (B1)

Maskar (B1)

Matalotodo (B1)

Mcshane (B1)

Mecca (B1)

Megatron (B1)

Mesh1 (B1)

MichaelPhcott (B1)

Mikota (B1)

MitKao (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Numberten (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Omniscient (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

PG1 (B1)

Phamished (B1)

Phareon (B1)

PhatCats2014 (B1)

PhenghisKhan (B1)

Phergie (B1)

Phipps (B1)

Phleuron (B1)

PhrankReynolds (B1)

PhrodoBaggins (B1)

Phunky (B1)

Piglet (B1)

PinheadLarry (B1)

Pinkman (B1)

Pipsqueak (B1)

Placalicious (B1)

Plmatters (B1)

Podrick (B1)

Pops (B1)

Potter (B1)

Prickles (B1)

ProfessorX (B1)

Puhltonio (B1)

QueenBeane (B1)

RedMaple (B1)

Riggan (B1)

Robyn (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

Samaymay (B1)

SassyCat97 (B1)

Schadenfreude (B1)

Scoot17C (B1)

SDcharge11 (B1)

Serendipity (B1)

Serpentine (B1)

Sheila (B1)

ShiVal (B1)

Sigman (B1)

Skippy (B1)

Solosis (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Squid (B1)

Squiggle (B1)

Struggle (B1)

Suffolk (B1)

Surely (B1)

Swish (B1)

TallGrassMM (B1)

Thora (B1)

ThreeOh3D2 (B1)

Timmi (B1)

TomBombadil (B1)

Trypo (B1)

TyrionL (B1)

UAch1 (B1)

UncleHowie (B1)

Vaishali24 (B1)

Valjean (B1)

Vaticameos (B1)

Veritas (B1)

Virapocalypse (B1)

Vista (B1)

Vivaldi (B1)

Vortex (B1)

Wallhey (B1)

Waterdiva (B1)

Xavier (B1)

Yoshand (B1)

YouGoGlencoco (B1)

Zaider (B1)

Zelda (B1)

Zonia (B1)

Imvubu (B10)

Indlovu (B11)

LilMcDreamy (B12)

BirdsNest (B13)

Arbiter (B2)

Ares (B2)

Bananafish (B2)

Boyle (B2)

Brownie5 (B2)

Coffee (B2)

Eaglehorse (B2)

Faze9 (B2)

FrenchFry (B2)

Glass (B2)

Godines (B2)

Hedgerow (B2)

Holeinone (B2)

ItsyBitsy1 (B2)

Kheth (B2)

Laurie (B2)

Lephleur (B2)

LizLemon (B2)

Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Sabella (B2)

TA17a (B2)

Tinciduntsolum (B2)

Tres (B2)

West99 (B2)

Abinghost (B3)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Heathcliff (B3)

Jackstina (B3)

Kamiyu (B3)

Marley1013 (B3)

Mortcellus (B3)

Morty007 (B3)

Nozo (B3)

Obutu (B3)

OrangeOswald (B3)

Phaedrus (B3)

Philly (B3)

Phlyer (B3)

Pipefish (B3)

RagingRooster (B3)

Rita1961 (B3)

RomaT (B3)

SynergyX (B3)

Tydolla (B3)

Yahalom (B3)

AlanGrant (B4)

Apex (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Hangman (B4)

JAMaL (B4)

Lolalove (B4)

Magpie (B4)

Mithril (B4)

Nigel (B4)

RawrgerThat (B4)

Stinger (B4)

Vincenzo (B4)

Waleliano (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

39HC (B6)

40BC (B6)

Hosp (B6)

Jolie1 (B6)

KayaCho (B6)

Saguaro (B7)

Thonko (B8)

CRB2 (B9)

Quesadilla (B9)

Annotating InstitutionJames Madison University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Vaishali24_1
(adenylate kinase)

Vaishali24_2
(terminase)

Vaishali24_3

Vaishali24_4

Vaishali24_5

Vaishali24_6
(RuvC-like resolvase)

Vaishali24_7
(membrane protein)

Vaishali24_8
(portal protein)

Vaishali24_9
(capsid maaturation protease and MuF-like fusion protein)

Vaishali24_10

Vaishali24_11
(major capsid protein)

Vaishali24_12

Vaishali24_13

Vaishali24_14
(membrane protein)

Vaishali24_15
(membrane protein)

Vaishali24_16
(membrane protein)

Vaishali24_17
(major tail protein)

Vaishali24_18

Vaishali24_19
(queuine tRNA-ribosyltransferase)

Vaishali24_20

Vaishali24_21
(head-to-tail adaptor)

Vaishali24_22

Vaishali24_23

Vaishali24_24
(tail assembly chaperone)

Vaishali24_25

Vaishali24_26

Vaishali24_27
(tape measure protein)

Vaishali24_28
(minor tail protein)

Vaishali24_29
(minor tail protein)

Vaishali24_30
(minor tail protein)

Vaishali24_31
(minor tail protein)

Vaishali24_32
(minor tail protein)

Vaishali24_33

Vaishali24_34

Vaishali24_35

Vaishali24_36

Vaishali24_37

Vaishali24_38

Vaishali24_39

Vaishali24_40

Vaishali24_41

Vaishali24_42

Vaishali24_43
(membrane protein)

Vaishali24_44
(helix-turn-helix DNA binding domain protein)

Vaishali24_45
(helix-turn-helix DNA binding domain protein)

Vaishali24_46

Vaishali24_47
(lysin A)

Vaishali24_48
(lysin B)

Vaishali24_49

Vaishali24_50

Vaishali24_51
(DNA helicase)

Vaishali24_52

Vaishali24_53

Vaishali24_54

Vaishali24_55

Vaishali24_56
(DNA primase/polyerase)

Vaishali24_57

Vaishali24_58

Vaishali24_59
(DNA polymerase I)

Vaishali24_60

Vaishali24_61

Vaishali24_62

Vaishali24_63

Vaishali24_64

Vaishali24_65

Vaishali24_66

Vaishali24_67

Vaishali24_68

Vaishali24_69

Vaishali24_70

Vaishali24_71
(helix-turn-helix DNA binding domain protein)

Vaishali24_72

Vaishali24_73

Vaishali24_74

Vaishali24_75

Vaishali24_76
(HNH endonuclease)

Vaishali24_77

Vaishali24_78

Vaishali24_79

Vaishali24_80

Vaishali24_81

Vaishali24_82

Vaishali24_83

Vaishali24_84

Vaishali24_85
(HNH endonuclease)

Vaishali24_86

Vaishali24_87

Vaishali24_88

Vaishali24_89

Vaishali24_90

Vaishali24_91

Vaishali24_92

Vaishali24_93

Vaishali24_94

Vaishali24_95

Vaishali24_96

Vaishali24_97

Vaishali24_98
(membrane protein)

Vaishali24_99

Vaishali24_100

Vaishali24_101

Vaishali24_102

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586058
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
EM PictureDownload
GenBank File for PhameratorDownload