Detailed Information for Phage Vaishali24 |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Former names | VaishaliVSM24 |
Found By | Saroha Vaishali |
Year Found | 2012 |
Location Found | Murthial, Sonipat, India |
Finding Institution | James Madison University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 29.0301 N, 77.0708 E Map |
Naming Notes | Named for one of the students who discovered it. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 19, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Genome length (bp) | 68398 |
Character of genome ends | Unknown |
GC Content | 66.6% |
Sequencing Notes | between 32762 - 32766 bp 40% reads contain string 4 T's instead of consensus 3 T's |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | James Madison University |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN586058 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |