Detailed Information for Phage Tres |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Rachel Pallister |
Year Found | 2014 |
Location Found | Harrisonburg, VA USA |
Finding Institution | James Madison University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 38.429196 N, 78.861398 W Map |
Discovery Notes | This phage was found in the Arboretum at James Madison University near the birdhouse. |
Naming Notes | I chose the name Tres for my phage because I found it on the third of September. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 19, 2014 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 300 |
Genome length (bp) | 67349 |
Character of genome ends | Circularly Permuted |
GC Content | 68.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B2 |
Cluster Life Cycle | Lytic |
Lysogeny Notes | My plaques are turbid which leads me to believe my phage is temperate. It can do lytic or lysogenic cycle. |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Plaques are turbid. |
Morphotype | Siphoviridae |
Number of Genes | 92 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KT365402 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4.6 x 10^9 |
Date of SEA Lysate Titering |
Oct 29, 2014 |
Pitt Freezer Box# |
15 |
Pitt Freezer Box Grid# |
B1 |
Available Files |
Plaque Picture | Download |