Mycobacterium phage Kloppinator
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Detailed Information for Phage Kloppinator
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByUriel Sanchez
Year Found2012
Location FoundBaltimore, MD USA
Finding InstitutionJohns Hopkins University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates39.3325 N, 76.616672 W Map
Discovery NotesSoil sample taken from a heavily vegetated area.
Naming NotesThis phage is dedicated to an amazing biology teacher and mentor.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 6, 2013
Sequencing FacilityVirginia Commonwealth University Nucleic Acids Research Facilities
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage110
Sanger Finishing Reactions6
Genome length (bp)68480
Character of genome endsCircularly Permuted
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Cluster Life CycleLytic
Other Cluster Members

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AbsoluteMadLad (B1)

ABU (B1)

AltPhacts (B1)

Altwerkus (B1)

Antonia (B1)

Apizium (B1)

Ashraf (B1)

Badfish (B1)

Banjo (B1)

BatteryCK (B1)

Beaglebox (B1)

Bishoperium (B1)

BlackStallion (B1)

Boehler (B1)

Buckeye (B1)

CamL (B1)

Cannibal (B1)

Carthage (B1)

Chah (B1)

CharlieGBrown (B1)

CheetO (B1)

Childish (B1)

Chorkpop (B1)

Chunky (B1)

Cobra (B1)

Colbert (B1)

Cosmolli16 (B1)

Craff (B1)

Crownjwl (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

Doddsville (B1)

DoesntMatter (B1)

DonSanchon (B1)

DuchessDung (B1)

Duggie (B1)

Durga (B1)

Emiris (B1)

EmpTee (B1)

Eremos (B1)

Eugenia (B1)

Fang (B1)

FluffyNinja (B1)

FriarPreacher (B1)

Fringe (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Gophee (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

HenryJackson (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Hocus (B1)

Horchata (B1)

HSavage (B1)

ImtiyazSitla (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JakeO (B1)

JangoPhett (B1)

Jillium (B1)

Jiminy (B1)

Kahve (B1)

Kailash (B1)

Keitherie (B1)

Kikipoo (B1)

KingTut (B1)

KingVeVeVe (B1)

KlimbOn (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

LeeLot (B1)

Lego3393 (B1)

Legolas (B1)

LemonSlice (B1)

Longacauda (B1)

LuckyMarjie (B1)

Lulumae (B1)

Mag7 (B1)

Mana (B1)

Manad (B1)

Maskar (B1)

Matalotodo (B1)

Mcshane (B1)

Mecca (B1)

Megatron (B1)

Mesh1 (B1)

MichaelPhcott (B1)

Mikota (B1)

MitKao (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Numberten (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Omniscient (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

PG1 (B1)

Phamished (B1)

Phareon (B1)

PhatCats2014 (B1)

PhenghisKhan (B1)

Phergie (B1)

Phipps (B1)

Phleuron (B1)

PhrankReynolds (B1)

PhrodoBaggins (B1)

Phunky (B1)

Piglet (B1)

PinheadLarry (B1)

Pinkman (B1)

Pipsqueak (B1)

Placalicious (B1)

Plmatters (B1)

Podrick (B1)

Pops (B1)

Potter (B1)

Prickles (B1)

ProfessorX (B1)

Puhltonio (B1)

QueenBeane (B1)

RedMaple (B1)

Riggan (B1)

Robyn (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

Samaymay (B1)

SassyCat97 (B1)

Schadenfreude (B1)

Scoot17C (B1)

SDcharge11 (B1)

Serendipity (B1)

Serpentine (B1)

Sheila (B1)

ShiVal (B1)

Sigman (B1)

Skippy (B1)

Solosis (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Squid (B1)

Squiggle (B1)

Struggle (B1)

Suffolk (B1)

Surely (B1)

Swish (B1)

TallGrassMM (B1)

Thora (B1)

ThreeOh3D2 (B1)

Timmi (B1)

TomBombadil (B1)

Trypo (B1)

TyrionL (B1)

UAch1 (B1)

UncleHowie (B1)

Vaishali24 (B1)

Valjean (B1)

Vaticameos (B1)

Veritas (B1)

Virapocalypse (B1)

Vista (B1)

Vivaldi (B1)

Vortex (B1)

Wallhey (B1)

Waterdiva (B1)

Xavier (B1)

Yoshand (B1)

YouGoGlencoco (B1)

Zaider (B1)

Zelda (B1)

Zonia (B1)

Imvubu (B10)

Indlovu (B11)

LilMcDreamy (B12)

BirdsNest (B13)

Arbiter (B2)

Ares (B2)

Bananafish (B2)

Boyle (B2)

Brownie5 (B2)

Coffee (B2)

Eaglehorse (B2)

Faze9 (B2)

FrenchFry (B2)

Glass (B2)

Godines (B2)

Hedgerow (B2)

Holeinone (B2)

ItsyBitsy1 (B2)

Kheth (B2)

Laurie (B2)

Lephleur (B2)

LizLemon (B2)

Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Sabella (B2)

TA17a (B2)

Tinciduntsolum (B2)

Tres (B2)

West99 (B2)

Abinghost (B3)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Heathcliff (B3)

Jackstina (B3)

Kamiyu (B3)

Marley1013 (B3)

Mortcellus (B3)

Morty007 (B3)

Nozo (B3)

Obutu (B3)

OrangeOswald (B3)

Phaedrus (B3)

Philly (B3)

Phlyer (B3)

Pipefish (B3)

RagingRooster (B3)

Rita1961 (B3)

RomaT (B3)

SynergyX (B3)

Tydolla (B3)

Yahalom (B3)

AlanGrant (B4)

Apex (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Hangman (B4)

JAMaL (B4)

Lolalove (B4)

Magpie (B4)

Mithril (B4)

Nigel (B4)

RawrgerThat (B4)

Stinger (B4)

Vincenzo (B4)

Waleliano (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

39HC (B6)

40BC (B6)

Hosp (B6)

Jolie1 (B6)

KayaCho (B6)

Saguaro (B7)

Thonko (B8)

CRB2 (B9)

Quesadilla (B9)

Annotating InstitutionDoane University
Annotation StatusIn GenBank
Plaque NotesPlaques are approximately 4mm in size.
Borders are clearly defined. No haziness or blurred edges.Plaques themselves are almost perfectly circular and are also clear with no blurring.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Kloppinator_1
(adenylate kinase)

Kloppinator_2
(terminase)

Kloppinator_3

Kloppinator_4

Kloppinator_5

Kloppinator_6
(RuvC-like resolvase)

Kloppinator_7
(membrane protein)

Kloppinator_8
(portal protein)

Kloppinator_9
(capsid maturation protease and MuF-like fusion protein)

Kloppinator_10
(HNH endonuclease)

Kloppinator_11

Kloppinator_12
(major capsid protein)

Kloppinator_13

Kloppinator_14

Kloppinator_15
(membrane protein)

Kloppinator_16
(membrane protein)

Kloppinator_17
(membrane protein)

Kloppinator_18
(major tail protein)

Kloppinator_19

Kloppinator_20
(queuine tRNA-ribosyltransferase)

Kloppinator_21

Kloppinator_22
(head-to-tail adaptor)

Kloppinator_23

Kloppinator_24

Kloppinator_25

Kloppinator_26

Kloppinator_27

Kloppinator_28
(tape measure protein)

Kloppinator_29
(minor tail protein)

Kloppinator_30
(minor tail protein)

Kloppinator_31
(minor tail protein)

Kloppinator_32
(minor tail protein)

Kloppinator_33
(minor tail protein)

Kloppinator_34

Kloppinator_35

Kloppinator_36

Kloppinator_37

Kloppinator_38

Kloppinator_39

Kloppinator_40

Kloppinator_41

Kloppinator_42

Kloppinator_43

Kloppinator_44

Kloppinator_45
(helix-turn-helix DNA binding domain)

Kloppinator_46
(helix-turn-helix DNA binding domain)

Kloppinator_47

Kloppinator_48

Kloppinator_49
(lysin A)

Kloppinator_50
(lysin B)

Kloppinator_51

Kloppinator_52

Kloppinator_53
(DNA helicase)

Kloppinator_54

Kloppinator_55

Kloppinator_56

Kloppinator_57

Kloppinator_58
(DNA primase/polymerase)

Kloppinator_59

Kloppinator_60

Kloppinator_61
(DNA polymerase I)

Kloppinator_62

Kloppinator_63

Kloppinator_64

Kloppinator_65

Kloppinator_66

Kloppinator_67

Kloppinator_68
(ribbon-helix-helix DNA binding domain)

Kloppinator_69

Kloppinator_70
(RNaseE)

Kloppinator_71

Kloppinator_72

Kloppinator_73

Kloppinator_74

Kloppinator_75
(HNH endonuclease)

Kloppinator_76

Kloppinator_77

Kloppinator_78

Kloppinator_79

Kloppinator_80

Kloppinator_81

Kloppinator_82

Kloppinator_83

Kloppinator_84
(HNH endonuclease)

Kloppinator_85

Kloppinator_86

Kloppinator_87

Kloppinator_88

Kloppinator_89

Kloppinator_90

Kloppinator_91

Kloppinator_92

Kloppinator_93

Kloppinator_94

Kloppinator_95

Kloppinator_96

Kloppinator_97

Kloppinator_98
(membrane protein)

Kloppinator_99

Kloppinator_100

Kloppinator_101

Kloppinator_102

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN585967
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Lysate Titer 3x10^10 pfu/ml!
Date of SEA Lysate Titering Nov 29, 2012
Pitt Freezer Box# 13
Pitt Freezer Box Grid# C1
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload