Mycobacterium phage YouGoGlencoco
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Detailed Information for Phage YouGoGlencoco
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByVicky Li
Year Found2012
Location FoundSt. Louis, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.648384 N, 90.309141 W Map
Discovery NotesWas found in the soil of Graham Chapel's Meditation Garden
Naming NotesThe movie Mean Girls
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 25, 2013
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage215
Genome length (bp)68608
Character of genome endsCircularly Permuted
GC Content66.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterB
SubclusterB1
Cluster Life CycleLytic
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Colbert (B1)

Cosmolli16 (B1)

Craff (B1)

Crownjwl (B1)

Daffy (B1)

Derpp (B1)

Dingo (B1)

Dione (B1)

Doddsville (B1)

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Fang (B1)

FluffyNinja (B1)

FriarPreacher (B1)

Fringe (B1)

FugateOSU (B1)

Gareth (B1)

GeneCoco (B1)

Gophee (B1)

Grand2040 (B1)

Gyarad (B1)

Haimas (B1)

Haleema (B1)

Hamish (B1)

Harvey (B1)

Held (B1)

HenryJackson (B1)

Hertubise (B1)

Hetaeria (B1)

HighStump (B1)

Hocus (B1)

Horchata (B1)

HSavage (B1)

ImtiyazSitla (B1)

Iridoclysis (B1)

IsaacEli (B1)

JacAttac (B1)

JakeO (B1)

JangoPhett (B1)

Jillium (B1)

Jiminy (B1)

Kahve (B1)

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Keitherie (B1)

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KingTut (B1)

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KlimbOn (B1)

Kloppinator (B1)

KLucky39 (B1)

Kwadwo (B1)

Kwksand96 (B1)

Labeouficaum (B1)

Lasso (B1)

LeeLot (B1)

Lego3393 (B1)

Legolas (B1)

LemonSlice (B1)

Longacauda (B1)

LuckyMarjie (B1)

Lulumae (B1)

Mag7 (B1)

Mana (B1)

Manad (B1)

Maskar (B1)

Matalotodo (B1)

Mcshane (B1)

Mecca (B1)

Megatron (B1)

Mesh1 (B1)

MichaelPhcott (B1)

Mikota (B1)

MitKao (B1)

Morgushi (B1)

Morty (B1)

Mosaic (B1)

MRabcd (B1)

Mulan (B1)

Murdoc (B1)

Mutante (B1)

Nacho (B1)

Newman (B1)

Numberten (B1)

Oline (B1)

Olive (B1)

OliverWalter (B1)

Omniscient (B1)

Oosterbaan (B1)

Orion (B1)

OSmaximus (B1)

PG1 (B1)

Phamished (B1)

Phareon (B1)

PhatCats2014 (B1)

PhenghisKhan (B1)

Phergie (B1)

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Phunky (B1)

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PinheadLarry (B1)

Pinkman (B1)

Pipsqueak (B1)

Placalicious (B1)

Plmatters (B1)

Podrick (B1)

Pops (B1)

Potter (B1)

Prickles (B1)

ProfessorX (B1)

Puhltonio (B1)

QueenBeane (B1)

RedMaple (B1)

Riggan (B1)

Robyn (B1)

Roliet (B1)

Roscoe (B1)

Roy17 (B1)

Samaymay (B1)

SassyCat97 (B1)

Schadenfreude (B1)

Scoot17C (B1)

SDcharge11 (B1)

Serendipity (B1)

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Sigman (B1)

Skippy (B1)

Solosis (B1)

Sophia (B1)

Soto (B1)

Spartan300 (B1)

Squid (B1)

Squiggle (B1)

Struggle (B1)

Suffolk (B1)

Surely (B1)

Swish (B1)

TallGrassMM (B1)

Thora (B1)

ThreeOh3D2 (B1)

Timmi (B1)

TomBombadil (B1)

Trypo (B1)

TyrionL (B1)

UAch1 (B1)

UncleHowie (B1)

Vaishali24 (B1)

Valjean (B1)

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Virapocalypse (B1)

Vista (B1)

Vivaldi (B1)

Vortex (B1)

Wallhey (B1)

Waterdiva (B1)

Xavier (B1)

Yoshand (B1)

YouGoGlencoco (B1)

Zaider (B1)

Zelda (B1)

Zonia (B1)

Imvubu (B10)

Indlovu (B11)

LilMcDreamy (B12)

BirdsNest (B13)

Arbiter (B2)

Ares (B2)

Bananafish (B2)

Boyle (B2)

Brownie5 (B2)

Coffee (B2)

Eaglehorse (B2)

Faze9 (B2)

FrenchFry (B2)

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Hedgerow (B2)

Holeinone (B2)

ItsyBitsy1 (B2)

Kheth (B2)

Laurie (B2)

Lephleur (B2)

LizLemon (B2)

Opia (B2)

Qyrzula (B2)

Rhinoforte (B2)

Rosebush (B2)

Sabella (B2)

TA17a (B2)

Tinciduntsolum (B2)

Tres (B2)

West99 (B2)

Abinghost (B3)

Akoma (B3)

Athena (B3)

Audrey (B3)

Baloo (B3)

Bernardo (B3)

ChaChing (B3)

Chandler (B3)

Compostia (B3)

Corofin (B3)

Daisy (B3)

Gadjet (B3)

Heathcliff (B3)

Jackstina (B3)

Kamiyu (B3)

Marley1013 (B3)

Mortcellus (B3)

Morty007 (B3)

Nozo (B3)

Obutu (B3)

OrangeOswald (B3)

Phaedrus (B3)

Philly (B3)

Phlyer (B3)

Pipefish (B3)

RagingRooster (B3)

Rita1961 (B3)

RomaT (B3)

SynergyX (B3)

Tydolla (B3)

Yahalom (B3)

AlanGrant (B4)

Apex (B4)

BrownCNA (B4)

ChrisnMich (B4)

Cooper (B4)

Fortunato (B4)

Frederick (B4)

Hangman (B4)

JAMaL (B4)

Lolalove (B4)

Magpie (B4)

Mithril (B4)

Nigel (B4)

RawrgerThat (B4)

Stinger (B4)

Vincenzo (B4)

Waleliano (B4)

Zemanar (B4)

Acadian (B5)

Baee (B5)

Donny (B5)

Phelemich (B5)

Reprobate (B5)

Rich (B5)

Serendipitous (B5)

39HC (B6)

40BC (B6)

Hosp (B6)

Jolie1 (B6)

KayaCho (B6)

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Thonko (B8)

CRB2 (B9)

Quesadilla (B9)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesSmall-ish plaques, circular, clear in the center with haziness on the edges.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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YouGoGlencoco_1
(adenylate kinase)

YouGoGlencoco_2
(terminase)

YouGoGlencoco_3

YouGoGlencoco_4

YouGoGlencoco_5

YouGoGlencoco_6
(RuvC-like resolvase)

YouGoGlencoco_7
(membrane protein)

YouGoGlencoco_8
(portal protein)

YouGoGlencoco_9
(capsid maturation protease and MuF-like fusion protein)

YouGoGlencoco_10
(HNH endonuclease)

YouGoGlencoco_11

YouGoGlencoco_12
(major capsid protein)

YouGoGlencoco_13

YouGoGlencoco_14

YouGoGlencoco_15
(membrane protein)

YouGoGlencoco_16
(membrane protein)

YouGoGlencoco_17
(membrane protein)

YouGoGlencoco_18
(major tail protein)

YouGoGlencoco_19

YouGoGlencoco_20
(queuine tRNA-ribosyltransferase)

YouGoGlencoco_21

YouGoGlencoco_22
(head-to-tail adaptor)

YouGoGlencoco_23

YouGoGlencoco_24

YouGoGlencoco_25
(tail assembly chaperone)

YouGoGlencoco_26

YouGoGlencoco_27

YouGoGlencoco_28
(tape measure protein)

YouGoGlencoco_29
(minor tail protein)

YouGoGlencoco_30
(membrane protein)

YouGoGlencoco_31
(membrane protein)

YouGoGlencoco_32
(membrane protein)

YouGoGlencoco_33
(membrane protein)

YouGoGlencoco_34

YouGoGlencoco_35

YouGoGlencoco_36

YouGoGlencoco_37

YouGoGlencoco_38

YouGoGlencoco_39

YouGoGlencoco_40

YouGoGlencoco_41

YouGoGlencoco_42

YouGoGlencoco_43

YouGoGlencoco_44
(membrane protein)

YouGoGlencoco_45
(helix-turn-helix DNA binding domain protein)

YouGoGlencoco_46
(helix-turn-helix DNA binding domain protein)

YouGoGlencoco_47

YouGoGlencoco_48
(lysin A)

YouGoGlencoco_49
(lysin B)

YouGoGlencoco_50

YouGoGlencoco_51

YouGoGlencoco_52
(DNA helicase)

YouGoGlencoco_53

YouGoGlencoco_54

YouGoGlencoco_55

YouGoGlencoco_56

YouGoGlencoco_57

YouGoGlencoco_58

YouGoGlencoco_59
(DNA primase/polymerase)

YouGoGlencoco_60

YouGoGlencoco_61
(DNA polymerase I)

YouGoGlencoco_62

YouGoGlencoco_63

YouGoGlencoco_64

YouGoGlencoco_65

YouGoGlencoco_66

YouGoGlencoco_67

YouGoGlencoco_68

YouGoGlencoco_69

YouGoGlencoco_70
(helix-turn-helix DNA binding protein)

YouGoGlencoco_71

YouGoGlencoco_72

YouGoGlencoco_73

YouGoGlencoco_74

YouGoGlencoco_75
(HNH endonuclease)

YouGoGlencoco_76

YouGoGlencoco_77

YouGoGlencoco_78

YouGoGlencoco_79

YouGoGlencoco_80

YouGoGlencoco_81

YouGoGlencoco_82

YouGoGlencoco_83

YouGoGlencoco_84
(HNH endonuclease)

YouGoGlencoco_85

YouGoGlencoco_86

YouGoGlencoco_87

YouGoGlencoco_88

YouGoGlencoco_89

YouGoGlencoco_90

YouGoGlencoco_91

YouGoGlencoco_92

YouGoGlencoco_93

YouGoGlencoco_94

YouGoGlencoco_95

YouGoGlencoco_96

YouGoGlencoco_97

YouGoGlencoco_98
(membrane protein)

YouGoGlencoco_99

YouGoGlencoco_100

YouGoGlencoco_101

YouGoGlencoco_102

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK279894
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 42
Pitt Freezer Box Grid# 30
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload