| Detailed Information for Phage Arbiter |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | John Cadena |
| Year Found | 2010 |
| Location Found | Fredericksburg, VA USA |
| Finding Institution | University of Mary Washington |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.303522 N, 77.476142 W Map |
| Discovery Notes | The soil sample was taken from the bank of a small stream on August 30, 2010 on a sunny 82°F day. The area was a moist environment composed of much vegetation. The type of soil acquired was light brown silt two feet from the stream and an inch down form the surface. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 13, 2011 |
| Genome length (bp) | 67169 |
| Character of genome ends | Circularly Permuted |
| GC Content | 68.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | large quantity of one and a half millimeter, clear, lytic plaques |
| Morphotype | Siphoviridae |
| Number of Genes | 88 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | JN618996 |
| Refseq Number | None yet |
| Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
| Archiving Info |
| Archiving status |
Archived |
| SEA Designator |
2010UMAWarbiterJC |
| Pitt Freezer Box# |
1 |
| Pitt Freezer Box Grid# |
B1 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
