Detailed Information for Phage Colbert |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Nicholas C. Lowery |
Year Found | 2008 |
Location Found | Corvallis, OR USA |
Finding Institution | Oregon State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 44.560263 N, 123.274323 W Map |
Discovery Notes | compost bin (leftmost compost bin, least digested food waste) by OSU Student Sustainability Center. Depth 8 cm |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jun 23, 2009 |
Genome length (bp) | 67774 |
Character of genome ends | Circularly Permuted |
GC Content | 66.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | <1mm plaques, clear center with cloudy halo. ~18 hour incubation at 37ºC |
Morphotype | Siphoviridae |
Number of Genes | 100 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | GQ303259 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Designator |
2009ORSTCOLBERTNL_ArchRep |
SEA Lysate Titer |
5e10 |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
25 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |