| Detailed Information for Phage Eremos |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Quynh Vo |
| Year Found | 2013 |
| Location Found | Cosco Junction, CA USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 36.936944 N, 117.930119 W Map |
| Discovery Notes | This soil sample was collected from a lake near Cosco Junction, called Dry Lake. It's basically a dried out lake. The soil was semi-wet at time of collection and was taken from the lake bed on the westward side of the lake. |
| Naming Notes | Since the original owner of this soil sample decided to abandon it, I decided to name the phage Erémos, which is Greek for abandoned or alone. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 3, 2014 |
| Sequencing Facility | University of North Texas |
| Shotgun Sequencing Method | Ion Torrent Sequencing |
| Approximate Shotgun Coverage | 152 |
| Genome length (bp) | 68472 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are fairly large, and are fast growers. Plaques are clear, round, and haver an average diameter of 1.5 mm. |
| Morphotype | Siphoviridae |
| Number of Genes | 99 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KM236502 |
| Refseq Number | None yet |
| Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
2 |
| Pitt Freezer Box Grid# |
B7 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
