| Detailed Information for Phage GeneCoco |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Alexa Hensal, Lauren Butler, and Amber McGraw |
| Year Found | 2014 |
| Location Found | Columbus, OH USA |
| Finding Institution | The Ohio State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 25°C |
| GPS Coordinates | 39.998333 N, 83.013297 W Map |
| Discovery Notes | The soil sample was collected from approximately 3 inches under a bed of mulch located under a large tree. The tree is located on campus in the area known as The Oval.
|
| Naming Notes | The name was modified from a character named Glenn Coco who appeared in the 2004 film Mean Girls. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 15, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 2139 |
| Genome length (bp) | 68547 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | The Ohio State University |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques were medium in size, circular in shape, and appeared to have a lysed center surrounded by an opaque halo. |
| Morphotype | Siphoviridae |
| Number of Genes | 100 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH479916 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
3.92 X 10 ^19 pfu/ml |
| Date of SEA Lysate Titering |
Oct 27, 2014 |
| Pitt Freezer Box# |
12 |
| Pitt Freezer Box Grid# |
B6 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
