Detailed Information for Phage Hedgerow |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Matt Luchansky |
Year Found | 2005 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.4443 N, 79.9532 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 20, 2011 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Genome length (bp) | 67451 |
Character of genome ends | Circularly Permuted |
GC Content | 69.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B2 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 92 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | JN698991 |
Refseq Number | None yet |
Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
2 |
Pitt Freezer Box Grid# |
A1 |
Available Files |
Virtual Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |