| Detailed Information for Phage ImtiyazSitla |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Imtiyaz Gulami (TATA CSIR OSDD Fellow) |
| Year Found | 2016 |
| Location Found | Mumbai, Maharashtra, India |
| Finding Institution | Acharya Narendra Dev College |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 28.539299 N, 77.263866 E Map |
| Discovery Notes | Isolated from a soil sample procured from Mumbai in a state called Maharashtra, India. The protocol followed for isolation of the Mycobacteriophages was as described in the manual "Phagehunting Teacher Workshop-2012". The work was carried out in Dr.Urmi Bajpai's laboratary at Department of Biomedical Science, Acharya Narendra Dev College, University of Delhi under PHAGE DISCOVERY Research Project (PDRP). |
| Naming Notes | The name of the phage is kept by the student Imtiyaz Gulami, TATA CSIR-OSDD Fellow who worked and discovered the Mycobacteriophage from the soil samples as a part of PHAGE DISCOVERY RESEARCH PROJECT (PDRP). The first six letters of "ImtiyazSitla" are taken from the name of the student: Imtiyaz and the letters Sitla stands for the location in which the soil was obtained. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 3, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1606 |
| Genome length (bp) | 69082 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Acharya Narendra Dev College |
| Annotation Status | In GenBank |
| Plaque Notes | The shape of the plaque which is circular ( 4 mm ) in diameter |
| Morphotype | Siphoviridae |
| Number of Genes | 103 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KY385382 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Ignore |
| Available Files |
| Plaque Picture | Download |
