| Detailed Information for Phage Khan1 |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Anaum Khan |
| Year Found | 2024 |
| Location Found | Detroit, MI United States |
| Finding Institution | University of Detroit Mercy |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 17°C |
| GPS Coordinates | 42.41 N, 83.14 W Map |
| Discovery Notes | It was found at the trees near the Quad and Shiple dorms. The sample type was soil, rocks, and wood chips. The location was a shady spot, with hard and drier ground. |
| Naming Notes | It is named Khan1, named after my last name and the number date of my birthdate. Khan's direct translation of a governing title given to kings to signify that my phage was the king and best one of this section. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 27, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 6962 |
| Genome length (bp) | 68556 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Detroit Mercy |
| Annotation Status | Being Annotated (Expected completion by 12/1/2025) |
| Plaque Notes | It was discovered to be a siphoviridae, a phage with a long tail. |
| Morphotype | Siphoviridae |
| Number of Genes | 101 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
217 |
| Pitt Freezer Box Grid# |
A6 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
