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Mycobacterium phage LasagnaCat

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Detailed Information for Phage LasagnaCat
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Kellin Saint, Owen McAvaddy, Ben Panella
Year Found	2023
Location Found	Philadelphia, PA United States
Finding Institution	Saint Joseph's University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	13°C
GPS Coordinates	39.94504 N, 75.20809 W Map
Discovery Notes	The soil sample was obtained from a butterfly garden in Philadelphia, PA at 12:55 PM on 2/9/2023. The sample was obtained at a depth of 1-3 cm from dry soil. The location of the garden is less than a meter from foot traffic, about two meters from buildings, and about 3-5 meters from roads.
Naming Notes	Named after the lasagna-loving, Monday-hating orange cat that everyone loves, Garfield.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jul 19, 2023
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina Sequencing
Approximate Shotgun Coverage	719
Genome length (bp)	68938
Character of genome ends	Circularly Permuted
GC Content	66.3%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	B
Subcluster	B1
Cluster Life Cycle	Lytic
Other Cluster Members	Click to View AbsoluteMadLad (B1) ABU (B1) Adriana (B1) Aelin (B1) AltPhacts (B1) Altwerkus (B1) Anderson (B1) Andre (B1) Antonia (B1) Apizium (B1) Ashraf (B1) Badfish (B1) Banjo (B1) Basato (B1) BatteryCK (B1) Beaglebox (B1) Bishoperium (B1) BlackStallion (B1) BlueHusk (B1) Bluephacebaby (B1) Boehler (B1) Brilliant (B1) Buckeye (B1) Burr (B1) CamL (B1) CampRoach (B1) Cannibal (B1) Carthage (B1) Chaelin (B1) Chah (B1) Charles1 (B1) CharlieGBrown (B1) CheetO (B1) Cher (B1) Childish (B1) Chorkpop (B1) Chunky (B1) Chute (B1) Cobra (B1) Colbert (B1) Coletti (B1) Cornobble (B1) Cosmolli16 (B1) Craff (B1) Crownjwl (B1) DaddyDaniels (B1) Daffy (B1) Daka (B1) Dati (B1) DelRivs (B1) Derpp (B1) Dice (B1) Dingo (B1) Dione (B1) DirtJuice (B1) Doddsville (B1) DoesntMatter (B1) DonSanchon (B1) DuchessDung (B1) Duggie (B1) Durga (B1) Emiris (B1) EmpTee (B1) Eremos (B1) Etaye (B1) Eugenia (B1) Fang (B1) FluffyNinja (B1) Fozzie (B1) Frankicide (B1) Freya (B1) FriarPreacher (B1) Fringe (B1) FugateOSU (B1) Gareth (B1) GeneCoco (B1) Giraffe (B1) Gophee (B1) Grand2040 (B1) Gwilliam (B1) Gyarad (B1) Haimas (B1) Haleema (B1) Hamish (B1) Hartsy (B1) Harvey (B1) Held (B1) HenryJackson (B1) Hertubise (B1) Hetaeria (B1) HighStump (B1) Hocus (B1) Horchata (B1) HSavage (B1) ImtiyazSitla (B1) Inchworm (B1) Inverness (B1) Iridoclysis (B1) IsaacEli (B1) JacAttac (B1) JakeO (B1) JangoPhett (B1) JDog (B1) Jillium (B1) Jiminy (B1) Jiraiya (B1) Kahve (B1) Kailash (B1) Katniss (B1) Keitherie (B1) Kikipoo (B1) Kimbrough (B1) KingTut (B1) KingVeVeVe (B1) KlimbOn (B1) Kloppinator (B1) KLucky39 (B1) Kwadwo (B1) Kwksand96 (B1) Labeouficaum (B1) LasagnaCat (B1) Lasso (B1) LeeLot (B1) Lego3393 (B1) Legolas (B1) LeiMonet (B1) LemonSlice (B1) Longacauda (B1) Lopsy (B1) LostAndPhound (B1) LuckyMarjie (B1) Lulumae (B1) Lulwa (B1) Lumine (B1) Mag7 (B1) Magic8 (B1) Mana (B1) Manad (B1) Maru (B1) Maskar (B1) Matalotodo (B1) Mcshane (B1) Mecca (B1) Megamind20 (B1) Megatron (B1) Melc17 (B1) MelsMeow (B1) Mesh1 (B1) MichaelPhcott (B1) Mikota (B1) MiniBoss (B1) MitKao (B1) Morgushi (B1) Morty (B1) Mosaic (B1) MRabcd (B1) MrPhizzler (B1) Mulan (B1) Murdoc (B1) Mutante (B1) Nacho (B1) Newman (B1) Nicole21 (B1) Numberten (B1) Nyala (B1) Olak (B1) Oline (B1) Olive (B1) OliverWalter (B1) Omniscient (B1) Oosterbaan (B1) Orfeu (B1) Orion (B1) Orwigg (B1) OSmaximus (B1) Pacifista (B1) PG1 (B1) Phamished (B1) Phareon (B1) PhatCats2014 (B1) PhatLouie (B1) PhenghisKhan (B1) Pherdinand (B1) Phergie (B1) Phipps (B1) Phleuron (B1) PhrankReynolds (B1) PhrodoBaggins (B1) Phunky (B1) Piglet (B1) PinheadLarry (B1) Pinkman (B1) Pipsqueak (B1) Placalicious (B1) Plmatters (B1) Podrick (B1) Pops (B1) Potter (B1) Prickles (B1) ProfessorX (B1) Puhltonio (B1) QueenBeane (B1) Quisquiliae (B1) RedMaple (B1) Ricotta (B1) Riggan (B1) Rimu (B1) Robyn (B1) Roliet (B1) Roscoe (B1) Roy17 (B1) Samaymay (B1) SassyCat97 (B1) Schadenfreude (B1) Schueller (B1) Scoot17C (B1) Scrick (B1) SDcharge11 (B1) Selr12 (B1) Serendipity (B1) Serpentine (B1) Sheila (B1) ShiVal (B1) Sigman (B1) SilverBell (B1) Simielle (B1) Skippy (B1) Slatt (B1) Soile (B1) Solosis (B1) Sophia (B1) Soto (B1) Spartan300 (B1) Squid (B1) Squiggle (B1) Struggle (B1) Suffolk (B1) Surely (B1) Swiphy (B1) Swish (B1) TallGrassMM (B1) Telesworld (B1) Thora (B1) ThreeOh3D2 (B1) Thunderbird (B1) Timmi (B1) TomBombadil (B1) Tomlarah (B1) Toni (B1) Tooj (B1) True (B1) Trypo (B1) TyrionL (B1) UAch1 (B1) UncleHowie (B1) Usavi (B1) Vaishali24 (B1) Valjean (B1) Vaticameos (B1) Veritas (B1) Virapocalypse (B1) Virgeve (B1) Vista (B1) Vivaldi (B1) Vortex (B1) Wallhey (B1) Waterdiva (B1) Weher20 (B1) Windsor (B1) Xavier (B1) Yoshand (B1) YouGoGlencoco (B1) Zaider (B1) Zelda (B1) Zonia (B1) Imvubu (B10) Indlovu (B11) LilMcDreamy (B12) BirdsNest (B13) Hashim76 (B13) Zenteno07 (B13) Allegro (B2) Arbiter (B2) Ares (B2) Bananafish (B2) Blocker23 (B2) Boyle (B2) Brownie5 (B2) Calamitous (B2) Coffee (B2) Eaglehorse (B2) Faze9 (B2) FrenchFry (B2) Glass (B2) Godines (B2) Hedgerow (B2) Holeinone (B2) ItsyBitsy1 (B2) Kaleb (B2) Kheth (B2) Lars (B2) Laurie (B2) Lephleur (B2) LizLemon (B2) MasterPo (B2) Opia (B2) Phantasmagoria (B2) Qyrzula (B2) Rhinoforte (B2) Rosebush (B2) Sabella (B2) TA17A (B2) Tinciduntsolum (B2) Tres (B2) Vic9 (B2) West99 (B2) Abinghost (B3) Akoma (B3) Athena (B3) Audrey (B3) Baloo (B3) Ben11 (B3) Bernardo (B3) Briakila (B3) Casbah (B3) ChaChing (B3) Chandler (B3) Compostia (B3) Corofin (B3) Daisy (B3) Deenasa (B3) Devonte (B3) Gadjet (B3) Gervas (B3) GlenHope (B3) Halfpint (B3) HarveySr (B3) Heathcliff (B3) Jackstina (B3) Kamiyu (B3) Kronus (B3) LestyG (B3) Marley1013 (B3) MmasiCarm (B3) Mortcellus (B3) Morty007 (B3) Neos5 (B3) Nozo (B3) Obutu (B3) OrangeOswald (B3) Phaedrus (B3) Phayeta (B3) Philly (B3) Phlyer (B3) Pipefish (B3) RagingRooster (B3) Rita1961 (B3) RomaT (B3) SlippinJimmy (B3) SynergyX (B3) Tydolla (B3) Yahalom (B3) Yinz (B3) Ahwei (B4) AlanGrant (B4) Antihero (B4) Apex (B4) Austelle (B4) BobbyK (B4) BrownCNA (B4) ChrisnMich (B4) Cooper (B4) Epah (B4) Fanaw (B4) Fortunato (B4) Frederick (B4) GinPorsche (B4) Hally898 (B4) Hangman (B4) Heath (B4) Hydro (B4) JaguarMi (B4) JAMaL (B4) Lambano (B4) Lolalove (B4) Magpie (B4) Mithril (B4) Mudslide (B4) Nanao (B4) Nigel (B4) Poster (B4) Prince (B4) QueenPie (B4) RawrgerThat (B4) Stinger (B4) Vincenzo (B4) VioletZ (B4) Waleliano (B4) Xincheng (B4) Zemanar (B4) Acadian (B5) Baee (B5) DigitDog (B5) Donny (B5) EastView9101 (B5) KarasumaRum (B5) Mysterious (B5) Nangang (B5) Nehemiah (B5) Phelemich (B5) Reprobate (B5) Rich (B5) Serendipitous (B5) Shenyu (B5) SirJeffery (B5) StinkyVeggy (B5) Suigeneris (B5) 39HC (B6) 40BC (B6) Hosp (B6) Jolie1 (B6) KayaCho (B6) Saguaro (B7) Thonko (B8) CRB2 (B9) Funsized (B9) Knocker (B9) PenguinLover67 (B9) Quesadilla (B9) Rinkes (B9)
Annotating Institution	Saint Joseph's University
Annotation Status	In GenBank
Plaque Notes	Plaques have clearly defined edges and range in diameter from less than 1 mm to about 5 mm.
Morphotype	Siphoviridae
Number of Genes	103
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View LasagnaCat_1 (adenylate kinase) LasagnaCat_2 (terminase) LasagnaCat_3 LasagnaCat_4 LasagnaCat_5 LasagnaCat_6 (RuvC-like resolvase) LasagnaCat_7 LasagnaCat_8 (portal protein) LasagnaCat_9 (capsid maturation protease) LasagnaCat_10 (HNH endonuclease) LasagnaCat_11 LasagnaCat_12 (major capsid hexamer protein) LasagnaCat_13 (major capsid pentamer protein) LasagnaCat_14 LasagnaCat_15 (holin) LasagnaCat_16 LasagnaCat_17 LasagnaCat_18 (major tail protein) LasagnaCat_19 LasagnaCat_20 (dpdA-like tRNA-guanine transglycosylase) LasagnaCat_21 LasagnaCat_22 (head-to-tail adaptor) LasagnaCat_23 LasagnaCat_24 LasagnaCat_25 LasagnaCat_26 LasagnaCat_27 LasagnaCat_28 (tape measure protein) LasagnaCat_29 (minor tail protein) LasagnaCat_30 (minor tail protein) LasagnaCat_31 (minor tail protein) LasagnaCat_32 (minor tail protein) LasagnaCat_33 (minor tail protein) LasagnaCat_34 LasagnaCat_35 LasagnaCat_36 LasagnaCat_37 LasagnaCat_38 LasagnaCat_39 LasagnaCat_40 LasagnaCat_41 LasagnaCat_42 LasagnaCat_43 LasagnaCat_44 LasagnaCat_45 (helix-turn-helix DNA binding domain) LasagnaCat_46 (helix-turn-helix DNA binding domain) LasagnaCat_47 LasagnaCat_48 LasagnaCat_49 (lysin A) LasagnaCat_50 (lysin B) LasagnaCat_51 LasagnaCat_52 (exonuclease) LasagnaCat_53 (DNA helicase) LasagnaCat_54 LasagnaCat_55 LasagnaCat_56 LasagnaCat_57 LasagnaCat_58 LasagnaCat_59 LasagnaCat_60 (DNA primase/helicase) LasagnaCat_61 LasagnaCat_62 (DNA polymerase I) LasagnaCat_63 LasagnaCat_64 LasagnaCat_65 LasagnaCat_66 LasagnaCat_67 LasagnaCat_68 LasagnaCat_69 LasagnaCat_70 LasagnaCat_71 (helix-turn-helix DNA binding domain) LasagnaCat_72 LasagnaCat_73 LasagnaCat_74 LasagnaCat_75 LasagnaCat_76 LasagnaCat_77 LasagnaCat_78 LasagnaCat_79 LasagnaCat_80 LasagnaCat_81 LasagnaCat_82 LasagnaCat_83 LasagnaCat_84 LasagnaCat_85 (HNH endonuclease) LasagnaCat_86 LasagnaCat_87 LasagnaCat_88 LasagnaCat_89 LasagnaCat_90 LasagnaCat_91 LasagnaCat_92 LasagnaCat_93 LasagnaCat_94 LasagnaCat_95 LasagnaCat_96 LasagnaCat_97 LasagnaCat_98 LasagnaCat_99 LasagnaCat_100 LasagnaCat_101 LasagnaCat_102 LasagnaCat_103
Submitted Minimal DNA Master File	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	PP978803
Refseq Number	None yet
Archiving Info
Archiving status	Archived
SEA Lysate Titer	2.9E-9 pfu/mL
Pitt Freezer Box#	166
Pitt Freezer Box Grid#	F3
Available Files
GenBank File for Phamerator	Download

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