Detailed Information for Phage LittleMinkey |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Dimpho Lukhele |
Year Found | 2025 |
Location Found | Cape Town, South Africa |
Finding Institution | TASK South Africa |
Program | Unavailable |
From enriched soil sample? | No |
Isolation Temperature | 37°C |
GPS Coordinates | 33.892667 S, 18.556412 E Map |
Discovery Notes | Soil was sampled approximately 2-3cm from the base of an outdoor plant, soil was moist, well aerated and rich in organic matter. It was then stored in a 40ml airtight specimen jar 24hours before phage enrichment with Mycobacterium Smegmatis. |
Naming Notes | Phage name is a combination of my nickname (Little Kenky), and my late little sister's name (Minnie) who I never got to see, both names special to my mom so my phage honours us as her girls and carries comfort. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 11, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 2172 |
Genome length (bp) | 70310 |
Character of genome ends | Circularly Permuted |
GC Content | 70.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B13 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | TASK South Africa |
Annotation Status | Being Annotated (Expected completion by 2/11/2026) |
Plaque Notes | Turbid plaques |
Has been Phamerated? | No |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
EM Picture | Download |