| Detailed Information for Phage Lopsy |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Edith Machowski |
| Year Found | 2022 |
| Location Found | Estcourt, South Africa |
| Finding Institution | University of the Witwatersrand |
| Program | Unavailable |
| From enriched soil sample? | No |
| Isolation Temperature | 37°C |
| GPS Coordinates | 28.924936 S, 29.780057 E Map |
| Discovery Notes | Lopsy was found in moist soil between clumps of aloes, approximately 20 cm under fallen leaves. |
| Naming Notes | Lopsy is a nickname for pet dog named Penelope. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Oct 20, 2022 |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 637 |
| Genome length (bp) | 68451 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Smooth, clear plaques. |
| Morphotype | Siphoviridae |
| Number of Genes | 98 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OQ685900 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
