Detailed Information for Phage Mecca |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Quinlyn Highsmith |
Year Found | 2017 |
Location Found | Washington, DC USA |
Finding Institution | Howard University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 21°C |
GPS Coordinates | 38.920556 N, 77.017778 W Map |
Naming Notes | Howard University is known as the Mecca, and this phage was found here! Therefore, it was only right that this phage was named after its’ founding location. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 21, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Genome length (bp) | 68890 |
Character of genome ends | Unknown |
GC Content | 66.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | B |
Subcluster | B1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Two morphologies. One small (1mm) and one medium (3mm) |
Morphotype | Siphoviridae |
Number of Genes | 102 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK279865 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4.8 x 10^10 |
Pitt Freezer Box# |
53 |
Pitt Freezer Box Grid# |
B11 |
Available Files |
Plaque Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |