Mycobacterium phage Mutante
Know something about this phage that we don't? Modify its data.
Recently Added Phages
DEleanor Nova211 Chevysilverado Javs DrummondkingRecently Modified Phages
Passiflora Fairlife Dirtydog Bunion VelmaraRecently Finished Phages
Liberone (GI) Neuvillette (FR) FatCactus (A20) Rossetti (L2) RoseMarie (None)Mycobacterium phage Mutante
Know something about this phage that we don't? Modify its data.
| Detailed Information for Phage Mutante | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Hannah Elizabeth Miller |
| Year Found | 2015 |
| Location Found | Bowling Green, KY USA |
| Finding Institution | Western Kentucky University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 36.986283 N, 86.456568 W Map |
| Discovery Notes | Soil sample collected from Western Kentucky University's campus on September 1, 2015. This area contained moist soil, and very little decay. Smokers often smoke in this area, and it is a heavily traveled. This phage has clear plaque mutant tendencies. The beginning plaques differ greatly in size from the plaques towards the end of my discovery. |
| Naming Notes | This phage has some clear plaque mutant tendencies; therefore, originally earning the name "Mutant." Since the term mutant has a specific scientific meaning and would be confusing when discussing the phage "Mutant," I chose to name my phage Mutante, which is mutant in Spanish. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 4, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2177 |
| Genome length (bp) | 68494 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Lysogeny Notes | Never had turbid plaques. |
| Other Cluster Members | |
| Annotating Institution | Western Kentucky University |
| Annotation Status | In GenBank |
| Plaque Notes | Beginning plaques: large clear plaques, organically shaped, very lytic Plaques during the middle of the process: very small, lytic organically shaped, tend to grow in a swirl pattern despite not being meant to grow that way |
| Morphotype | Siphoviridae |
| Number of Genes | 103 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH399780 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Designator | 2015WEKUMutanteHEM |
| SEA Lysate Titer | 1.6x10^10 |
| Date of SEA Lysate Titering | Oct 20, 2015 |
| Pitt Freezer Box# | 27 |
| Pitt Freezer Box Grid# | F5 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
