| Detailed Information for Phage Piglet |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Zane Barrus |
| Year Found | 2010 |
| Location Found | Alpine, UT USA |
| Finding Institution | Brigham Young University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.488679 N, 111.771898 W Map |
| Discovery Notes | Temp: 85°F
Soil Type: Moist, swampy, pond edge soil, 1 cm depth |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 26, 2012 |
| Sequencing Facility | BYU DNA Sequencing Center |
| Shotgun Sequencing Method | 454 Pyrosequencing |
| Approximate Shotgun Coverage | 61 |
| Genome length (bp) | 68992 |
| Character of genome ends | Circularly Permuted |
| GC Content | 66.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | B |
| Subcluster | B1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | 1 mm diameter translucent plaques. Little to no variation between individual plaques on the same plate, however on different plates, size was as little as .5 mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 101 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | JX649097 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Designator |
2010BRYOpigletEZB |
| Pitt Freezer Box# |
11 |
| Pitt Freezer Box Grid# |
55 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
